Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.46■■□□□ 1.03
FntaQ61239 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.46■■□□□ 1.03
FntaQ61239 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.46■■□□□ 1.03
FntaQ61239 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FntaQ61239 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FntaQ61239 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FntaQ61239 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
FntaQ61239 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
FntaQ61239 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FntaQ61239 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.45■■□□□ 1.02
FntaQ61239 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FntaQ61239 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FntaQ61239 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FntaQ61239 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FntaQ61239 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FntaQ61239 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
FntaQ61239 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FntaQ61239 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FntaQ61239 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FntaQ61239 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FntaQ61239 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
FntaQ61239 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FntaQ61239 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.44■■□□□ 1.02
FntaQ61239 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FntaQ61239 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
FntaQ61239 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
FntaQ61239 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.43■■□□□ 1.02
FntaQ61239 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FntaQ61239 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
FntaQ61239 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FntaQ61239 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FntaQ61239 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FntaQ61239 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FntaQ61239 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FntaQ61239 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FntaQ61239 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.43■■□□□ 1.02
FntaQ61239 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FntaQ61239 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
FntaQ61239 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FntaQ61239 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FntaQ61239 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FntaQ61239 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FntaQ61239 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
FntaQ61239 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
FntaQ61239 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
FntaQ61239 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
FntaQ61239 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FntaQ61239 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FntaQ61239 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FntaQ61239 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
FntaQ61239 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.4■■□□□ 1.02
FntaQ61239 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
FntaQ61239 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FntaQ61239 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FntaQ61239 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
FntaQ61239 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.4■■□□□ 1.02
FntaQ61239 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
FntaQ61239 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
FntaQ61239 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
FntaQ61239 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
FntaQ61239 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
FntaQ61239 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FntaQ61239 Gm10420-201ENSMUST00000121713 882 ntBASIC21.39■■□□□ 1.01
FntaQ61239 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.39■■□□□ 1.01
FntaQ61239 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FntaQ61239 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
FntaQ61239 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
FntaQ61239 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FntaQ61239 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FntaQ61239 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FntaQ61239 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
FntaQ61239 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FntaQ61239 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.38■■□□□ 1.01
FntaQ61239 Gm12366-201ENSMUST00000121722 873 ntBASIC21.38■■□□□ 1.01
FntaQ61239 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.38■■□□□ 1.01
FntaQ61239 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.38■■□□□ 1.01
FntaQ61239 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FntaQ61239 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.38■■□□□ 1.01
FntaQ61239 Gm5786-201ENSMUST00000085368 882 ntBASIC21.38■■□□□ 1.01
FntaQ61239 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FntaQ61239 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.38■■□□□ 1.01
FntaQ61239 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FntaQ61239 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
FntaQ61239 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
FntaQ61239 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.37■■□□□ 1.01
FntaQ61239 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FntaQ61239 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FntaQ61239 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FntaQ61239 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms