Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Hcfc1Q61191 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hcfc1Q61191 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.38■□□□□ 0.37
Hcfc1Q61191 Gm11421-201ENSMUST00000122124 294 ntBASIC17.38■□□□□ 0.37
Hcfc1Q61191 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hcfc1Q61191 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hcfc1Q61191 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.38■□□□□ 0.37
Hcfc1Q61191 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hcfc1Q61191 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.37■□□□□ 0.37
Hcfc1Q61191 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcfc1Q61191 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.37■□□□□ 0.37
Hcfc1Q61191 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.37■□□□□ 0.37
Hcfc1Q61191 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hcfc1Q61191 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcfc1Q61191 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcfc1Q61191 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hcfc1Q61191 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hcfc1Q61191 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hcfc1Q61191 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcfc1Q61191 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcfc1Q61191 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.36■□□□□ 0.37
Hcfc1Q61191 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcfc1Q61191 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcfc1Q61191 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.36■□□□□ 0.37
Hcfc1Q61191 Gm18671-201ENSMUST00000214826 683 ntBASIC17.36■□□□□ 0.37
Hcfc1Q61191 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hcfc1Q61191 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.36■□□□□ 0.37
Hcfc1Q61191 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcfc1Q61191 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.36■□□□□ 0.37
Hcfc1Q61191 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcfc1Q61191 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcfc1Q61191 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcfc1Q61191 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcfc1Q61191 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hcfc1Q61191 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Hcfc1Q61191 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcfc1Q61191 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.34■□□□□ 0.37
Hcfc1Q61191 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hcfc1Q61191 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.34■□□□□ 0.37
Hcfc1Q61191 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Hcfc1Q61191 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcfc1Q61191 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hcfc1Q61191 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcfc1Q61191 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcfc1Q61191 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.33■□□□□ 0.37
Hcfc1Q61191 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcfc1Q61191 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hcfc1Q61191 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hcfc1Q61191 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcfc1Q61191 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcfc1Q61191 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcfc1Q61191 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hcfc1Q61191 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcfc1Q61191 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcfc1Q61191 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hcfc1Q61191 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Gm42778-201ENSMUST00000199644 553 ntBASIC17.32■□□□□ 0.36
Hcfc1Q61191 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hcfc1Q61191 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hcfc1Q61191 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.31■□□□□ 0.36
Hcfc1Q61191 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.31■□□□□ 0.36
Hcfc1Q61191 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1Q61191 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1Q61191 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.31■□□□□ 0.36
Hcfc1Q61191 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1Q61191 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1Q61191 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.31■□□□□ 0.36
Hcfc1Q61191 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hcfc1Q61191 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.31■□□□□ 0.36
Hcfc1Q61191 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hcfc1Q61191 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1Q61191 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1Q61191 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1Q61191 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1Q61191 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1Q61191 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1Q61191 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.3■□□□□ 0.36
Hcfc1Q61191 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.3■□□□□ 0.36
Hcfc1Q61191 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Hcfc1Q61191 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hcfc1Q61191 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1Q61191 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hcfc1Q61191 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1Q61191 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1Q61191 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcfc1Q61191 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcfc1Q61191 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcfc1Q61191 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcfc1Q61191 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.28■□□□□ 0.36
Hcfc1Q61191 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms