Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn11Q60771 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cldn11Q60771 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn11Q60771 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn11Q60771 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn11Q60771 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn11Q60771 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Cldn11Q60771 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn11Q60771 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn11Q60771 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn11Q60771 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn11Q60771 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn11Q60771 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn11Q60771 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cldn11Q60771 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn11Q60771 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn11Q60771 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn11Q60771 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.09■□□□□ 0.97
Cldn11Q60771 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.09■□□□□ 0.97
Cldn11Q60771 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn11Q60771 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.09■□□□□ 0.97
Cldn11Q60771 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn11Q60771 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn11Q60771 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn11Q60771 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn11Q60771 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn11Q60771 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn11Q60771 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn11Q60771 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.08■□□□□ 0.97
Cldn11Q60771 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn11Q60771 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cldn11Q60771 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn11Q60771 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.08■□□□□ 0.96
Cldn11Q60771 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn11Q60771 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn11Q60771 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn11Q60771 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn11Q60771 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn11Q60771 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn11Q60771 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cldn11Q60771 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn11Q60771 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn11Q60771 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.06■□□□□ 0.96
Cldn11Q60771 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
Cldn11Q60771 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
Cldn11Q60771 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Cldn11Q60771 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn11Q60771 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn11Q60771 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn11Q60771 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.05■□□□□ 0.96
Cldn11Q60771 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.05■□□□□ 0.96
Cldn11Q60771 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldn11Q60771 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.05■□□□□ 0.96
Cldn11Q60771 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn11Q60771 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Cldn11Q60771 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn11Q60771 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn11Q60771 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.04■□□□□ 0.96
Cldn11Q60771 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn11Q60771 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn11Q60771 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn11Q60771 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cldn11Q60771 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Cldn11Q60771 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn11Q60771 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn11Q60771 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn11Q60771 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn11Q60771 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn11Q60771 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cldn11Q60771 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn11Q60771 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn11Q60771 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cldn11Q60771 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
Cldn11Q60771 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn11Q60771 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn11Q60771 Mir7075-201ENSMUST00000184187 82 ntBASIC21.02■□□□□ 0.96
Cldn11Q60771 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.02■□□□□ 0.96
Cldn11Q60771 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cldn11Q60771 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn11Q60771 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Cldn11Q60771 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cldn11Q60771 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn11Q60771 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Cldn11Q60771 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cldn11Q60771 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cldn11Q60771 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn11Q60771 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn11Q60771 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cldn11Q60771 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn11Q60771 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms