Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav3-1Q5R1I8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav3-1Q5R1I8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav3-1Q5R1I8 Particl-201ENSMUST00000205370 1560 ntBASIC13.83□□□□□ -0.19
Trav3-1Q5R1I8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav3-1Q5R1I8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav3-1Q5R1I8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3-1Q5R1I8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3-1Q5R1I8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3-1Q5R1I8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3-1Q5R1I8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3-1Q5R1I8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav3-1Q5R1I8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3-1Q5R1I8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav3-1Q5R1I8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Golph3-205ENSMUST00000228671 2842 ntBASIC13.82□□□□□ -0.2
Trav3-1Q5R1I8 Gm37847-201ENSMUST00000192163 1497 ntBASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Gm31748-201ENSMUST00000194938 1497 ntBASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Rab21-202ENSMUST00000218831 843 ntBASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav3-1Q5R1I8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav3-1Q5R1I8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms