Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7d-4Q5R1H9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7d-4Q5R1H9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav7d-4Q5R1H9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7d-4Q5R1H9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7d-4Q5R1H9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7d-4Q5R1H9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7d-4Q5R1H9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-4Q5R1H9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-4Q5R1H9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-4Q5R1H9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-4Q5R1H9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-4Q5R1H9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav7d-4Q5R1H9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav7d-4Q5R1H9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-4Q5R1H9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-4Q5R1H9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-4Q5R1H9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7d-4Q5R1H9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7d-4Q5R1H9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav7d-4Q5R1H9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7d-4Q5R1H9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav7d-4Q5R1H9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav7d-4Q5R1H9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7d-4Q5R1H9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav7d-4Q5R1H9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7d-4Q5R1H9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav7d-4Q5R1H9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
Trav7d-4Q5R1H9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-4Q5R1H9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-4Q5R1H9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-4Q5R1H9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-4Q5R1H9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-4Q5R1H9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Trav7d-4Q5R1H9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-4Q5R1H9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-4Q5R1H9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav7d-4Q5R1H9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-4Q5R1H9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-4Q5R1H9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-4Q5R1H9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.44■□□□□ 0.06
Trav7d-4Q5R1H9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-4Q5R1H9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-4Q5R1H9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-4Q5R1H9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav7d-4Q5R1H9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav7d-4Q5R1H9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-4Q5R1H9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Gm44428-201ENSMUST00000204474 874 ntBASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav7d-4Q5R1H9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-4Q5R1H9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms