Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav8d-1Q5R1H8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8d-1Q5R1H8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.52■□□□□ 0.24
Trav8d-1Q5R1H8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav8d-1Q5R1H8 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.52■□□□□ 0.23
Trav8d-1Q5R1H8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8d-1Q5R1H8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8d-1Q5R1H8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8d-1Q5R1H8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trav8d-1Q5R1H8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trav8d-1Q5R1H8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8d-1Q5R1H8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8d-1Q5R1H8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8d-1Q5R1H8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8d-1Q5R1H8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-1Q5R1H8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-1Q5R1H8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-1Q5R1H8 Gm5921-201ENSMUST00000075898 882 ntBASIC16.49■□□□□ 0.23
Trav8d-1Q5R1H8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-1Q5R1H8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8d-1Q5R1H8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8d-1Q5R1H8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav8d-1Q5R1H8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav8d-1Q5R1H8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Trav8d-1Q5R1H8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Trav8d-1Q5R1H8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav8d-1Q5R1H8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav8d-1Q5R1H8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms