Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col27a1Q5QNQ9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.24■□□□□ 0.83
Col27a1Q5QNQ9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col27a1Q5QNQ9 Gm4968-201ENSMUST00000071458 858 ntBASIC20.23■□□□□ 0.83
Col27a1Q5QNQ9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col27a1Q5QNQ9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col27a1Q5QNQ9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col27a1Q5QNQ9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.23■□□□□ 0.83
Col27a1Q5QNQ9 Mir7071-201ENSMUST00000184847 69 ntBASIC20.23■□□□□ 0.83
Col27a1Q5QNQ9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.22■□□□□ 0.83
Col27a1Q5QNQ9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.22■□□□□ 0.83
Col27a1Q5QNQ9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.22■□□□□ 0.83
Col27a1Q5QNQ9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col27a1Q5QNQ9 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.22■□□□□ 0.83
Col27a1Q5QNQ9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.21■□□□□ 0.83
Col27a1Q5QNQ9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.21■□□□□ 0.83
Col27a1Q5QNQ9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.21■□□□□ 0.83
Col27a1Q5QNQ9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.21■□□□□ 0.83
Col27a1Q5QNQ9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col27a1Q5QNQ9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Col27a1Q5QNQ9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col27a1Q5QNQ9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Col27a1Q5QNQ9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Col27a1Q5QNQ9 Reep4-203ENSMUST00000226563 1444 ntBASIC20.18■□□□□ 0.82
Col27a1Q5QNQ9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col27a1Q5QNQ9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col27a1Q5QNQ9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col27a1Q5QNQ9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col27a1Q5QNQ9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col27a1Q5QNQ9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col27a1Q5QNQ9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col27a1Q5QNQ9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.18■□□□□ 0.82
Col27a1Q5QNQ9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col27a1Q5QNQ9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col27a1Q5QNQ9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Col27a1Q5QNQ9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col27a1Q5QNQ9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.17■□□□□ 0.82
Col27a1Q5QNQ9 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.17■□□□□ 0.82
Col27a1Q5QNQ9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Mir5133-201ENSMUST00000174955 77 ntBASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Gm20760-201ENSMUST00000179197 648 ntBASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col27a1Q5QNQ9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col27a1Q5QNQ9 Gm13148-201ENSMUST00000118892 745 ntBASIC20.14■□□□□ 0.81
Col27a1Q5QNQ9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Col27a1Q5QNQ9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Gm27801-201ENSMUST00000184174 223 ntBASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col27a1Q5QNQ9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col27a1Q5QNQ9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Col27a1Q5QNQ9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col27a1Q5QNQ9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col27a1Q5QNQ9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col27a1Q5QNQ9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col27a1Q5QNQ9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col27a1Q5QNQ9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 Gm22325-201ENSMUST00000158904 308 ntBASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col27a1Q5QNQ9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col27a1Q5QNQ9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col27a1Q5QNQ9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col27a1Q5QNQ9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col27a1Q5QNQ9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col27a1Q5QNQ9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col27a1Q5QNQ9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Col27a1Q5QNQ9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col27a1Q5QNQ9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms