Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps13aQ5H8C4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps13aQ5H8C4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps13aQ5H8C4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.59■□□□□ 0.89
Vps13aQ5H8C4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.59■□□□□ 0.89
Vps13aQ5H8C4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps13aQ5H8C4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps13aQ5H8C4 Gm13148-201ENSMUST00000118892 745 ntBASIC20.58■□□□□ 0.89
Vps13aQ5H8C4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Vps13aQ5H8C4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps13aQ5H8C4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps13aQ5H8C4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Vps13aQ5H8C4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps13aQ5H8C4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps13aQ5H8C4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 Gm20760-201ENSMUST00000179197 648 ntBASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Vps13aQ5H8C4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.55■□□□□ 0.88
Vps13aQ5H8C4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps13aQ5H8C4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps13aQ5H8C4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps13aQ5H8C4 Gm12441-201ENSMUST00000121806 588 ntBASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Gm43530-201ENSMUST00000195920 274 ntBASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Gm4968-201ENSMUST00000071458 858 ntBASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps13aQ5H8C4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.53■□□□□ 0.88
Vps13aQ5H8C4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13aQ5H8C4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13aQ5H8C4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13aQ5H8C4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13aQ5H8C4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13aQ5H8C4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps13aQ5H8C4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Vps13aQ5H8C4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps13aQ5H8C4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps13aQ5H8C4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps13aQ5H8C4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps13aQ5H8C4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps13aQ5H8C4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps13aQ5H8C4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps13aQ5H8C4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Vps13aQ5H8C4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vps13aQ5H8C4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vps13aQ5H8C4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps13aQ5H8C4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps13aQ5H8C4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vps13aQ5H8C4 Reep4-203ENSMUST00000226563 1444 ntBASIC20.51■□□□□ 0.87
Vps13aQ5H8C4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.51■□□□□ 0.87
Vps13aQ5H8C4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Vps13aQ5H8C4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps13aQ5H8C4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps13aQ5H8C4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.5■□□□□ 0.87
Vps13aQ5H8C4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.5■□□□□ 0.87
Vps13aQ5H8C4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vps13aQ5H8C4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps13aQ5H8C4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps13aQ5H8C4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13aQ5H8C4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13aQ5H8C4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13aQ5H8C4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13aQ5H8C4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13aQ5H8C4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13aQ5H8C4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13aQ5H8C4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13aQ5H8C4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps13aQ5H8C4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps13aQ5H8C4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.48■□□□□ 0.87
Vps13aQ5H8C4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps13aQ5H8C4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Vps13aQ5H8C4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps13aQ5H8C4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.47■□□□□ 0.87
Vps13aQ5H8C4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 126.4 ms