Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim80Q3V061 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim80Q3V061 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim80Q3V061 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim80Q3V061 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim80Q3V061 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim80Q3V061 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim80Q3V061 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim80Q3V061 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim80Q3V061 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim80Q3V061 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim80Q3V061 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim80Q3V061 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
Trim80Q3V061 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim80Q3V061 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim80Q3V061 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim80Q3V061 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim80Q3V061 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim80Q3V061 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim80Q3V061 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim80Q3V061 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.76■□□□□ 0.91
Trim80Q3V061 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim80Q3V061 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim80Q3V061 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Trim80Q3V061 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim80Q3V061 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim80Q3V061 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim80Q3V061 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.74■□□□□ 0.91
Trim80Q3V061 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim80Q3V061 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim80Q3V061 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim80Q3V061 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim80Q3V061 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim80Q3V061 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim80Q3V061 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim80Q3V061 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim80Q3V061 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim80Q3V061 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim80Q3V061 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim80Q3V061 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.73■□□□□ 0.91
Trim80Q3V061 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim80Q3V061 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim80Q3V061 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim80Q3V061 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim80Q3V061 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim80Q3V061 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim80Q3V061 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim80Q3V061 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim80Q3V061 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim80Q3V061 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.72■□□□□ 0.91
Trim80Q3V061 Gm9959-201ENSMUST00000068277 390 ntBASIC20.72■□□□□ 0.91
Trim80Q3V061 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.72■□□□□ 0.91
Trim80Q3V061 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim80Q3V061 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim80Q3V061 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim80Q3V061 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim80Q3V061 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Trim80Q3V061 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim80Q3V061 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Trim80Q3V061 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim80Q3V061 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim80Q3V061 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim80Q3V061 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim80Q3V061 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Trim80Q3V061 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Trim80Q3V061 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.7■□□□□ 0.9
Trim80Q3V061 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim80Q3V061 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Trim80Q3V061 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim80Q3V061 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim80Q3V061 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim80Q3V061 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trim80Q3V061 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim80Q3V061 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim80Q3V061 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim80Q3V061 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim80Q3V061 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim80Q3V061 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim80Q3V061 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim80Q3V061 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim80Q3V061 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim80Q3V061 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim80Q3V061 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim80Q3V061 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.69■□□□□ 0.9
Trim80Q3V061 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim80Q3V061 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms