Protein–RNA interactions for Protein: Q3U5Q7

Cmpk2, UMP-CMP kinase 2, mitochondrial, mousemouse

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmpk2Q3U5Q7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cmpk2Q3U5Q7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.88■□□□□ 0.61
Cmpk2Q3U5Q7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cmpk2Q3U5Q7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cmpk2Q3U5Q7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cmpk2Q3U5Q7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cmpk2Q3U5Q7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cmpk2Q3U5Q7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cmpk2Q3U5Q7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cmpk2Q3U5Q7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.87■□□□□ 0.61
Cmpk2Q3U5Q7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.87■□□□□ 0.61
Cmpk2Q3U5Q7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cmpk2Q3U5Q7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cmpk2Q3U5Q7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cmpk2Q3U5Q7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cmpk2Q3U5Q7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cmpk2Q3U5Q7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cmpk2Q3U5Q7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cmpk2Q3U5Q7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cmpk2Q3U5Q7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cmpk2Q3U5Q7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.85■□□□□ 0.61
Cmpk2Q3U5Q7 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.85■□□□□ 0.61
Cmpk2Q3U5Q7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cmpk2Q3U5Q7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cmpk2Q3U5Q7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cmpk2Q3U5Q7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cmpk2Q3U5Q7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cmpk2Q3U5Q7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cmpk2Q3U5Q7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cmpk2Q3U5Q7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.84■□□□□ 0.61
Cmpk2Q3U5Q7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cmpk2Q3U5Q7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cmpk2Q3U5Q7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cmpk2Q3U5Q7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cmpk2Q3U5Q7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cmpk2Q3U5Q7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cmpk2Q3U5Q7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Cmpk2Q3U5Q7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.83■□□□□ 0.6
Cmpk2Q3U5Q7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cmpk2Q3U5Q7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cmpk2Q3U5Q7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cmpk2Q3U5Q7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cmpk2Q3U5Q7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cmpk2Q3U5Q7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cmpk2Q3U5Q7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cmpk2Q3U5Q7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Cmpk2Q3U5Q7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Cmpk2Q3U5Q7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.81■□□□□ 0.6
Cmpk2Q3U5Q7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.81■□□□□ 0.6
Cmpk2Q3U5Q7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cmpk2Q3U5Q7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cmpk2Q3U5Q7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cmpk2Q3U5Q7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cmpk2Q3U5Q7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cmpk2Q3U5Q7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cmpk2Q3U5Q7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cmpk2Q3U5Q7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cmpk2Q3U5Q7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Rps24-207ENSMUST00000224568 714 ntBASIC18.78■□□□□ 0.6
Cmpk2Q3U5Q7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 165.9 ms