Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.24■□□□□ 0.35
Cln6Q3U466 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cln6Q3U466 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cln6Q3U466 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Cln6Q3U466 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.23■□□□□ 0.35
Cln6Q3U466 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.23■□□□□ 0.35
Cln6Q3U466 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln6Q3U466 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cln6Q3U466 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln6Q3U466 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cln6Q3U466 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln6Q3U466 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cln6Q3U466 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.22■□□□□ 0.35
Cln6Q3U466 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cln6Q3U466 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln6Q3U466 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Cln6Q3U466 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln6Q3U466 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.21■□□□□ 0.35
Cln6Q3U466 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.21■□□□□ 0.35
Cln6Q3U466 Gm12366-201ENSMUST00000121722 873 ntBASIC17.21■□□□□ 0.35
Cln6Q3U466 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.21■□□□□ 0.35
Cln6Q3U466 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.21■□□□□ 0.35
Cln6Q3U466 Gm5786-201ENSMUST00000085368 882 ntBASIC17.21■□□□□ 0.35
Cln6Q3U466 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cln6Q3U466 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cln6Q3U466 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cln6Q3U466 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cln6Q3U466 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cln6Q3U466 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cln6Q3U466 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln6Q3U466 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cln6Q3U466 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln6Q3U466 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.19■□□□□ 0.34
Cln6Q3U466 Mir6538-201ENSMUST00000183713 110 ntBASIC17.19■□□□□ 0.34
Cln6Q3U466 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cln6Q3U466 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln6Q3U466 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln6Q3U466 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cln6Q3U466 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.18■□□□□ 0.34
Cln6Q3U466 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.18■□□□□ 0.34
Cln6Q3U466 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cln6Q3U466 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Cln6Q3U466 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cln6Q3U466 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cln6Q3U466 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cln6Q3U466 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cln6Q3U466 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cln6Q3U466 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.18■□□□□ 0.34
Cln6Q3U466 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.18■□□□□ 0.34
Cln6Q3U466 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cln6Q3U466 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cln6Q3U466 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cln6Q3U466 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Cln6Q3U466 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cln6Q3U466 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.17■□□□□ 0.34
Cln6Q3U466 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms