Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rnf149Q3U2C5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf149Q3U2C5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf149Q3U2C5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf149Q3U2C5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rnf149Q3U2C5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf149Q3U2C5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf149Q3U2C5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf149Q3U2C5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf149Q3U2C5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf149Q3U2C5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf149Q3U2C5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf149Q3U2C5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf149Q3U2C5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.15■□□□□ 0.5
Rnf149Q3U2C5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.15■□□□□ 0.5
Rnf149Q3U2C5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf149Q3U2C5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf149Q3U2C5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf149Q3U2C5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf149Q3U2C5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Rnf149Q3U2C5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf149Q3U2C5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.14■□□□□ 0.49
Rnf149Q3U2C5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf149Q3U2C5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf149Q3U2C5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf149Q3U2C5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf149Q3U2C5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf149Q3U2C5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf149Q3U2C5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf149Q3U2C5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf149Q3U2C5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf149Q3U2C5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rnf149Q3U2C5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf149Q3U2C5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.13■□□□□ 0.49
Rnf149Q3U2C5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf149Q3U2C5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf149Q3U2C5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rnf149Q3U2C5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf149Q3U2C5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.12■□□□□ 0.49
Rnf149Q3U2C5 Gm45444-201ENSMUST00000211394 898 ntBASIC18.12■□□□□ 0.49
Rnf149Q3U2C5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rnf149Q3U2C5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf149Q3U2C5 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.12■□□□□ 0.49
Rnf149Q3U2C5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf149Q3U2C5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf149Q3U2C5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf149Q3U2C5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf149Q3U2C5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.11■□□□□ 0.49
Rnf149Q3U2C5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf149Q3U2C5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf149Q3U2C5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf149Q3U2C5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf149Q3U2C5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf149Q3U2C5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf149Q3U2C5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf149Q3U2C5 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.1■□□□□ 0.49
Rnf149Q3U2C5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf149Q3U2C5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf149Q3U2C5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf149Q3U2C5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf149Q3U2C5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf149Q3U2C5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf149Q3U2C5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Rnf149Q3U2C5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms