Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox4Q06831 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox4Q06831 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.99■□□□□ 0.79
Sox4Q06831 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox4Q06831 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.99■□□□□ 0.79
Sox4Q06831 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox4Q06831 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox4Q06831 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox4Q06831 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox4Q06831 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.98■□□□□ 0.79
Sox4Q06831 Gm43530-201ENSMUST00000195920 274 ntBASIC19.98■□□□□ 0.79
Sox4Q06831 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
Sox4Q06831 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox4Q06831 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox4Q06831 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox4Q06831 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox4Q06831 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox4Q06831 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox4Q06831 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.98■□□□□ 0.79
Sox4Q06831 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.97■□□□□ 0.79
Sox4Q06831 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox4Q06831 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.97■□□□□ 0.79
Sox4Q06831 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sox4Q06831 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sox4Q06831 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.97■□□□□ 0.79
Sox4Q06831 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox4Q06831 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox4Q06831 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox4Q06831 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox4Q06831 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox4Q06831 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox4Q06831 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sox4Q06831 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox4Q06831 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox4Q06831 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox4Q06831 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sox4Q06831 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sox4Q06831 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox4Q06831 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox4Q06831 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sox4Q06831 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sox4Q06831 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sox4Q06831 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox4Q06831 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox4Q06831 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox4Q06831 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox4Q06831 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.93■□□□□ 0.78
Sox4Q06831 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox4Q06831 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox4Q06831 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sox4Q06831 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sox4Q06831 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sox4Q06831 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.92■□□□□ 0.78
Sox4Q06831 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.92■□□□□ 0.78
Sox4Q06831 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.92■□□□□ 0.78
Sox4Q06831 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.92■□□□□ 0.78
Sox4Q06831 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sox4Q06831 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sox4Q06831 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
Sox4Q06831 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sox4Q06831 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox4Q06831 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sox4Q06831 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sox4Q06831 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
Sox4Q06831 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sox4Q06831 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sox4Q06831 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sox4Q06831 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.9■□□□□ 0.78
Sox4Q06831 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sox4Q06831 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox4Q06831 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.9■□□□□ 0.78
Sox4Q06831 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox4Q06831 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
Sox4Q06831 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.9■□□□□ 0.78
Sox4Q06831 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Sox4Q06831 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sox4Q06831 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sox4Q06831 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sox4Q06831 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Sox4Q06831 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sox4Q06831 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms