Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smn1P97801 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smn1P97801 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smn1P97801 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smn1P97801 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smn1P97801 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.39■□□□□ 0.38
Smn1P97801 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smn1P97801 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.39■□□□□ 0.37
Smn1P97801 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smn1P97801 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smn1P97801 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smn1P97801 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Smn1P97801 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.38■□□□□ 0.37
Smn1P97801 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smn1P97801 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smn1P97801 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smn1P97801 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smn1P97801 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smn1P97801 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smn1P97801 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smn1P97801 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smn1P97801 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.37■□□□□ 0.37
Smn1P97801 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.37■□□□□ 0.37
Smn1P97801 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smn1P97801 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.37■□□□□ 0.37
Smn1P97801 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smn1P97801 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.37■□□□□ 0.37
Smn1P97801 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smn1P97801 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Smn1P97801 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.36■□□□□ 0.37
Smn1P97801 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.36■□□□□ 0.37
Smn1P97801 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.36■□□□□ 0.37
Smn1P97801 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smn1P97801 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smn1P97801 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smn1P97801 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smn1P97801 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.35■□□□□ 0.37
Smn1P97801 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Smn1P97801 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smn1P97801 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smn1P97801 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smn1P97801 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smn1P97801 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smn1P97801 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smn1P97801 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Smn1P97801 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smn1P97801 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smn1P97801 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.34■□□□□ 0.37
Smn1P97801 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smn1P97801 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.34■□□□□ 0.37
Smn1P97801 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smn1P97801 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smn1P97801 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smn1P97801 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smn1P97801 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Smn1P97801 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.34■□□□□ 0.37
Smn1P97801 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smn1P97801 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smn1P97801 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smn1P97801 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smn1P97801 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smn1P97801 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smn1P97801 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.33■□□□□ 0.36
Smn1P97801 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smn1P97801 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smn1P97801 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.33■□□□□ 0.36
Smn1P97801 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smn1P97801 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smn1P97801 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smn1P97801 Gm11175-201ENSMUST00000116172 543 ntBASIC17.32■□□□□ 0.36
Smn1P97801 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smn1P97801 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smn1P97801 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smn1P97801 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smn1P97801 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smn1P97801 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.31■□□□□ 0.36
Smn1P97801 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.31■□□□□ 0.36
Smn1P97801 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smn1P97801 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms