Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43bP86448 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim43bP86448 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Trim43bP86448 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim43bP86448 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim43bP86448 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim43bP86448 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim43bP86448 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43bP86448 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43bP86448 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43bP86448 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim43bP86448 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43bP86448 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43bP86448 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.82■□□□□ 0.92
Trim43bP86448 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43bP86448 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim43bP86448 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.81■□□□□ 0.92
Trim43bP86448 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43bP86448 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43bP86448 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43bP86448 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trim43bP86448 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Trim43bP86448 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43bP86448 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim43bP86448 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Trim43bP86448 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43bP86448 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim43bP86448 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43bP86448 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43bP86448 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43bP86448 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim43bP86448 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim43bP86448 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43bP86448 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43bP86448 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43bP86448 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim43bP86448 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43bP86448 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43bP86448 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43bP86448 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim43bP86448 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.79■□□□□ 0.92
Trim43bP86448 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim43bP86448 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43bP86448 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43bP86448 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43bP86448 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim43bP86448 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim43bP86448 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43bP86448 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43bP86448 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim43bP86448 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim43bP86448 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim43bP86448 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trim43bP86448 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43bP86448 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43bP86448 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim43bP86448 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43bP86448 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43bP86448 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Trim43bP86448 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43bP86448 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim43bP86448 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim43bP86448 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Trim43bP86448 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim43bP86448 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim43bP86448 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim43bP86448 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim43bP86448 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43bP86448 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43bP86448 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim43bP86448 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim43bP86448 Gm9959-201ENSMUST00000068277 390 ntBASIC20.75■□□□□ 0.91
Trim43bP86448 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trim43bP86448 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43bP86448 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.74■□□□□ 0.91
Trim43bP86448 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.74■□□□□ 0.91
Trim43bP86448 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43bP86448 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.74■□□□□ 0.91
Trim43bP86448 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43bP86448 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Trim43bP86448 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43bP86448 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim43bP86448 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim43bP86448 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.73■□□□□ 0.91
Trim43bP86448 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43bP86448 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43bP86448 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim43bP86448 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43bP86448 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim43bP86448 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43bP86448 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim43bP86448 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim43bP86448 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Trim43bP86448 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43bP86448 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43bP86448 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim43bP86448 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim43bP86448 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim43bP86448 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Trim43bP86448 Gm14117-201ENSMUST00000122417 843 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms