Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SgcbP82349 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SgcbP82349 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcbP82349 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcbP82349 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
SgcbP82349 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcbP82349 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcbP82349 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
SgcbP82349 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SgcbP82349 Golgb1-201ENSMUST00000023534 498 ntBASIC18.1■□□□□ 0.49
SgcbP82349 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SgcbP82349 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcbP82349 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcbP82349 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcbP82349 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SgcbP82349 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SgcbP82349 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.09■□□□□ 0.49
SgcbP82349 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SgcbP82349 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SgcbP82349 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.08■□□□□ 0.49
SgcbP82349 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SgcbP82349 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SgcbP82349 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SgcbP82349 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SgcbP82349 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.08■□□□□ 0.48
SgcbP82349 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
SgcbP82349 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SgcbP82349 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SgcbP82349 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SgcbP82349 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.07■□□□□ 0.48
SgcbP82349 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.07■□□□□ 0.48
SgcbP82349 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SgcbP82349 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.07■□□□□ 0.48
SgcbP82349 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcbP82349 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.06■□□□□ 0.48
SgcbP82349 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SgcbP82349 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcbP82349 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcbP82349 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcbP82349 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.06■□□□□ 0.48
SgcbP82349 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcbP82349 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcbP82349 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SgcbP82349 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SgcbP82349 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.06■□□□□ 0.48
SgcbP82349 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SgcbP82349 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SgcbP82349 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.05■□□□□ 0.48
SgcbP82349 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SgcbP82349 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SgcbP82349 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SgcbP82349 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.05■□□□□ 0.48
SgcbP82349 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SgcbP82349 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SgcbP82349 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SgcbP82349 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SgcbP82349 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SgcbP82349 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
SgcbP82349 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SgcbP82349 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SgcbP82349 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.04■□□□□ 0.48
SgcbP82349 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.04■□□□□ 0.48
SgcbP82349 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SgcbP82349 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SgcbP82349 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SgcbP82349 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.03■□□□□ 0.48
SgcbP82349 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.03■□□□□ 0.48
SgcbP82349 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SgcbP82349 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SgcbP82349 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SgcbP82349 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SgcbP82349 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.02■□□□□ 0.48
SgcbP82349 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms