Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcdP82347 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcdP82347 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcdP82347 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcdP82347 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcdP82347 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SgcdP82347 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcdP82347 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SgcdP82347 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcdP82347 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcdP82347 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcdP82347 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.63■□□□□ 0.57
SgcdP82347 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcdP82347 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcdP82347 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SgcdP82347 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcdP82347 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SgcdP82347 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SgcdP82347 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SgcdP82347 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
SgcdP82347 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SgcdP82347 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcdP82347 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.62■□□□□ 0.57
SgcdP82347 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SgcdP82347 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcdP82347 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SgcdP82347 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SgcdP82347 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcdP82347 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SgcdP82347 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcdP82347 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcdP82347 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SgcdP82347 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcdP82347 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SgcdP82347 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SgcdP82347 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcdP82347 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SgcdP82347 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.61■□□□□ 0.57
SgcdP82347 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcdP82347 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.61■□□□□ 0.57
SgcdP82347 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.61■□□□□ 0.57
SgcdP82347 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcdP82347 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SgcdP82347 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SgcdP82347 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SgcdP82347 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SgcdP82347 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcdP82347 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SgcdP82347 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SgcdP82347 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SgcdP82347 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.6■□□□□ 0.57
SgcdP82347 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.6■□□□□ 0.57
SgcdP82347 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SgcdP82347 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SgcdP82347 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.6■□□□□ 0.57
SgcdP82347 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SgcdP82347 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcdP82347 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcdP82347 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcdP82347 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcdP82347 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcdP82347 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcdP82347 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SgcdP82347 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SgcdP82347 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SgcdP82347 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SgcdP82347 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SgcdP82347 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SgcdP82347 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SgcdP82347 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SgcdP82347 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SgcdP82347 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.58■□□□□ 0.56
SgcdP82347 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.58■□□□□ 0.56
SgcdP82347 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SgcdP82347 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SgcdP82347 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.58■□□□□ 0.56
SgcdP82347 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.58■□□□□ 0.56
SgcdP82347 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SgcdP82347 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SgcdP82347 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SgcdP82347 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SgcdP82347 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SgcdP82347 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SgcdP82347 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SgcdP82347 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcdP82347 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcdP82347 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcdP82347 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcdP82347 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcdP82347 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SgcdP82347 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcdP82347 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.56■□□□□ 0.56
SgcdP82347 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcdP82347 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SgcdP82347 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
SgcdP82347 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.56■□□□□ 0.56
SgcdP82347 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms