Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Msx3P70354 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msx3P70354 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Msx3P70354 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Msx3P70354 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msx3P70354 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msx3P70354 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Msx3P70354 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Msx3P70354 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.93■□□□□ 0.94
Msx3P70354 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.93■□□□□ 0.94
Msx3P70354 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msx3P70354 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.92■□□□□ 0.94
Msx3P70354 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.92■□□□□ 0.94
Msx3P70354 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msx3P70354 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msx3P70354 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msx3P70354 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msx3P70354 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.91■□□□□ 0.94
Msx3P70354 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msx3P70354 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msx3P70354 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.91■□□□□ 0.94
Msx3P70354 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.91■□□□□ 0.94
Msx3P70354 Gm7143-201ENSMUST00000222811 859 ntBASIC20.91■□□□□ 0.94
Msx3P70354 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.91■□□□□ 0.94
Msx3P70354 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msx3P70354 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.9■□□□□ 0.94
Msx3P70354 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Gm5812-201ENSMUST00000061073 957 ntBASIC20.9■□□□□ 0.94
Msx3P70354 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.9■□□□□ 0.94
Msx3P70354 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msx3P70354 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.89■□□□□ 0.94
Msx3P70354 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Msx3P70354 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msx3P70354 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msx3P70354 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.89■□□□□ 0.93
Msx3P70354 Gm15820-201ENSMUST00000201566 728 ntBASIC20.89■□□□□ 0.93
Msx3P70354 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Msx3P70354 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Msx3P70354 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Msx3P70354 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Msx3P70354 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Msx3P70354 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msx3P70354 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Msx3P70354 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Msx3P70354 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Msx3P70354 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Msx3P70354 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Msx3P70354 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msx3P70354 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Msx3P70354 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Msx3P70354 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msx3P70354 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.86■□□□□ 0.93
Msx3P70354 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.86■□□□□ 0.93
Msx3P70354 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msx3P70354 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msx3P70354 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.86■□□□□ 0.93
Msx3P70354 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msx3P70354 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msx3P70354 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msx3P70354 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Msx3P70354 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msx3P70354 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Msx3P70354 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msx3P70354 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msx3P70354 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msx3P70354 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Msx3P70354 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Msx3P70354 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msx3P70354 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Msx3P70354 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Msx3P70354 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msx3P70354 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msx3P70354 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msx3P70354 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msx3P70354 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msx3P70354 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msx3P70354 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msx3P70354 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msx3P70354 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msx3P70354 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Msx3P70354 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Msx3P70354 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms