Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx1P63006 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lhx1P63006 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.03■□□□□ 0.8
Lhx1P63006 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx1P63006 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lhx1P63006 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lhx1P63006 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx1P63006 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx1P63006 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx1P63006 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Lhx1P63006 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx1P63006 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx1P63006 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Lhx1P63006 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx1P63006 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx1P63006 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx1P63006 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx1P63006 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx1P63006 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx1P63006 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.01■□□□□ 0.79
Lhx1P63006 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Lhx1P63006 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx1P63006 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx1P63006 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx1P63006 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Lhx1P63006 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Lhx1P63006 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20■□□□□ 0.79
Lhx1P63006 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20■□□□□ 0.79
Lhx1P63006 Gm43137-201ENSMUST00000198052 594 ntBASIC20■□□□□ 0.79
Lhx1P63006 Gm45417-201ENSMUST00000209533 758 ntBASIC20■□□□□ 0.79
Lhx1P63006 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx1P63006 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx1P63006 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.99■□□□□ 0.79
Lhx1P63006 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.99■□□□□ 0.79
Lhx1P63006 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx1P63006 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx1P63006 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.98■□□□□ 0.79
Lhx1P63006 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.98■□□□□ 0.79
Lhx1P63006 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
Lhx1P63006 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.98■□□□□ 0.79
Lhx1P63006 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.98■□□□□ 0.79
Lhx1P63006 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx1P63006 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.98■□□□□ 0.79
Lhx1P63006 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx1P63006 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lhx1P63006 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx1P63006 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx1P63006 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx1P63006 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx1P63006 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Lhx1P63006 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Lhx1P63006 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx1P63006 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.97■□□□□ 0.79
Lhx1P63006 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx1P63006 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Lhx1P63006 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx1P63006 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx1P63006 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx1P63006 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx1P63006 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Lhx1P63006 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx1P63006 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx1P63006 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx1P63006 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.96■□□□□ 0.79
Lhx1P63006 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx1P63006 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Lhx1P63006 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx1P63006 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx1P63006 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Lhx1P63006 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx1P63006 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx1P63006 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.95■□□□□ 0.78
Lhx1P63006 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.95■□□□□ 0.78
Lhx1P63006 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx1P63006 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx1P63006 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx1P63006 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.95■□□□□ 0.78
Lhx1P63006 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx1P63006 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx1P63006 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Lhx1P63006 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx1P63006 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx1P63006 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx1P63006 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
Lhx1P63006 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
Lhx1P63006 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx1P63006 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx1P63006 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx1P63006 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms