Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vps33bP59016 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vps33bP59016 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vps33bP59016 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Vps33bP59016 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Vps33bP59016 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vps33bP59016 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Vps33bP59016 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Vps33bP59016 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC26.28■■□□□ 1.8
Vps33bP59016 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Vps33bP59016 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Vps33bP59016 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Vps33bP59016 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Vps33bP59016 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Vps33bP59016 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Vps33bP59016 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC26.27■■□□□ 1.8
Vps33bP59016 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC26.27■■□□□ 1.8
Vps33bP59016 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Vps33bP59016 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Vps33bP59016 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.27■■□□□ 1.8
Vps33bP59016 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Vps33bP59016 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Vps33bP59016 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Vps33bP59016 Gm14281-201ENSMUST00000121700 1294 ntBASIC26.26■■□□□ 1.79
Vps33bP59016 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC26.26■■□□□ 1.79
Vps33bP59016 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Vps33bP59016 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC26.26■■□□□ 1.79
Vps33bP59016 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
Vps33bP59016 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC26.26■■□□□ 1.79
Vps33bP59016 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Vps33bP59016 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Vps33bP59016 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC26.25■■□□□ 1.79
Vps33bP59016 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Vps33bP59016 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Vps33bP59016 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC26.25■■□□□ 1.79
Vps33bP59016 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Vps33bP59016 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Vps33bP59016 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Vps33bP59016 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Vps33bP59016 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Vps33bP59016 Gm13234-201ENSMUST00000120010 747 ntBASIC26.24■■□□□ 1.79
Vps33bP59016 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Vps33bP59016 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Vps33bP59016 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Vps33bP59016 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
Vps33bP59016 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Vps33bP59016 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Vps33bP59016 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Vps33bP59016 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Vps33bP59016 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Vps33bP59016 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Vps33bP59016 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC26.22■■□□□ 1.79
Vps33bP59016 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC26.22■■□□□ 1.79
Vps33bP59016 Gm9988-201ENSMUST00000069786 435 ntBASIC26.22■■□□□ 1.79
Vps33bP59016 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC26.22■■□□□ 1.79
Vps33bP59016 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Vps33bP59016 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Vps33bP59016 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Vps33bP59016 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC26.21■■□□□ 1.79
Vps33bP59016 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Vps33bP59016 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Vps33bP59016 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Vps33bP59016 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Vps33bP59016 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Vps33bP59016 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Vps33bP59016 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Vps33bP59016 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Vps33bP59016 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Vps33bP59016 Gm44949-201ENSMUST00000206423 1450 ntBASIC26.19■■□□□ 1.78
Vps33bP59016 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Vps33bP59016 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Vps33bP59016 Gm12441-201ENSMUST00000121806 588 ntBASIC26.19■■□□□ 1.78
Vps33bP59016 Nespas-201ENSMUST00000143738 1083 ntBASIC26.19■■□□□ 1.78
Vps33bP59016 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC26.19■■□□□ 1.78
Vps33bP59016 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vps33bP59016 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vps33bP59016 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC26.19■■□□□ 1.78
Vps33bP59016 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Vps33bP59016 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Vps33bP59016 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Vps33bP59016 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Vps33bP59016 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC26.18■■□□□ 1.78
Vps33bP59016 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Vps33bP59016 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Vps33bP59016 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26.18■■□□□ 1.78
Vps33bP59016 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC26.17■■□□□ 1.78
Vps33bP59016 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vps33bP59016 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vps33bP59016 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vps33bP59016 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.17■■□□□ 1.78
Vps33bP59016 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Vps33bP59016 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Vps33bP59016 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC26.16■■□□□ 1.78
Vps33bP59016 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC26.16■■□□□ 1.78
Vps33bP59016 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Vps33bP59016 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Vps33bP59016 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Vps33bP59016 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Vps33bP59016 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Vps33bP59016 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms