Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SmoP56726 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SmoP56726 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SmoP56726 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SmoP56726 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.53■□□□□ 0.88
SmoP56726 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SmoP56726 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.53■□□□□ 0.88
SmoP56726 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SmoP56726 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SmoP56726 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SmoP56726 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SmoP56726 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SmoP56726 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.52■□□□□ 0.88
SmoP56726 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.52■□□□□ 0.88
SmoP56726 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SmoP56726 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SmoP56726 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SmoP56726 Gm45417-201ENSMUST00000209533 758 ntBASIC20.52■□□□□ 0.88
SmoP56726 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
SmoP56726 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SmoP56726 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SmoP56726 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SmoP56726 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SmoP56726 Gm15039-201ENSMUST00000118914 875 ntBASIC20.51■□□□□ 0.87
SmoP56726 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SmoP56726 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SmoP56726 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SmoP56726 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SmoP56726 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SmoP56726 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SmoP56726 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.5■□□□□ 0.87
SmoP56726 Gm43137-201ENSMUST00000198052 594 ntBASIC20.5■□□□□ 0.87
SmoP56726 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.5■□□□□ 0.87
SmoP56726 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SmoP56726 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SmoP56726 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.49■□□□□ 0.87
SmoP56726 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SmoP56726 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SmoP56726 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SmoP56726 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SmoP56726 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SmoP56726 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.49■□□□□ 0.87
SmoP56726 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SmoP56726 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SmoP56726 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SmoP56726 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SmoP56726 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SmoP56726 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SmoP56726 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SmoP56726 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.48■□□□□ 0.87
SmoP56726 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SmoP56726 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SmoP56726 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SmoP56726 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SmoP56726 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SmoP56726 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SmoP56726 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SmoP56726 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SmoP56726 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SmoP56726 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SmoP56726 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SmoP56726 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SmoP56726 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SmoP56726 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SmoP56726 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.47■□□□□ 0.87
SmoP56726 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.47■□□□□ 0.87
SmoP56726 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.47■□□□□ 0.87
SmoP56726 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SmoP56726 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.46■□□□□ 0.87
SmoP56726 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.46■□□□□ 0.87
SmoP56726 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SmoP56726 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SmoP56726 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SmoP56726 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SmoP56726 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SmoP56726 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SmoP56726 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SmoP56726 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SmoP56726 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SmoP56726 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SmoP56726 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.44■□□□□ 0.86
SmoP56726 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.44■□□□□ 0.86
SmoP56726 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms