Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nub1P54729 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nub1P54729 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nub1P54729 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.83■■□□□ 1.09
Nub1P54729 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.83■■□□□ 1.09
Nub1P54729 Gm9870-201ENSMUST00000063874 645 ntBASIC21.83■■□□□ 1.09
Nub1P54729 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nub1P54729 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nub1P54729 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nub1P54729 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nub1P54729 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Nub1P54729 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Nub1P54729 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nub1P54729 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nub1P54729 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.82■■□□□ 1.08
Nub1P54729 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nub1P54729 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nub1P54729 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Nub1P54729 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nub1P54729 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.82■■□□□ 1.08
Nub1P54729 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.82■■□□□ 1.08
Nub1P54729 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nub1P54729 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.81■■□□□ 1.08
Nub1P54729 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
Nub1P54729 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.81■■□□□ 1.08
Nub1P54729 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Nub1P54729 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nub1P54729 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Nub1P54729 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nub1P54729 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.8■■□□□ 1.08
Nub1P54729 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nub1P54729 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nub1P54729 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Nub1P54729 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nub1P54729 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nub1P54729 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nub1P54729 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Nub1P54729 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nub1P54729 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Nub1P54729 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nub1P54729 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nub1P54729 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nub1P54729 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nub1P54729 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nub1P54729 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.78■■□□□ 1.08
Nub1P54729 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nub1P54729 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nub1P54729 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nub1P54729 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Nub1P54729 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nub1P54729 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nub1P54729 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nub1P54729 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.77■■□□□ 1.08
Nub1P54729 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.77■■□□□ 1.08
Nub1P54729 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nub1P54729 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Nub1P54729 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nub1P54729 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Nub1P54729 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nub1P54729 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nub1P54729 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nub1P54729 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nub1P54729 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nub1P54729 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nub1P54729 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nub1P54729 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nub1P54729 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nub1P54729 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.74■■□□□ 1.07
Nub1P54729 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Nub1P54729 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nub1P54729 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nub1P54729 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Nub1P54729 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Nub1P54729 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nub1P54729 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Nub1P54729 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.73■■□□□ 1.07
Nub1P54729 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.73■■□□□ 1.07
Nub1P54729 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nub1P54729 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nub1P54729 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Nub1P54729 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nub1P54729 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Nub1P54729 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.72■■□□□ 1.07
Nub1P54729 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nub1P54729 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
Nub1P54729 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nub1P54729 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms