Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rfx3P48381 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx3P48381 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx3P48381 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rfx3P48381 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx3P48381 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx3P48381 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx3P48381 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx3P48381 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.29■□□□□ 0.52
Rfx3P48381 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rfx3P48381 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx3P48381 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx3P48381 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx3P48381 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx3P48381 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.27■□□□□ 0.52
Rfx3P48381 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.27■□□□□ 0.52
Rfx3P48381 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx3P48381 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx3P48381 Golph3-202ENSMUST00000226517 2359 ntBASIC18.27■□□□□ 0.52
Rfx3P48381 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx3P48381 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx3P48381 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx3P48381 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.26■□□□□ 0.51
Rfx3P48381 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx3P48381 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx3P48381 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rfx3P48381 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx3P48381 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rfx3P48381 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx3P48381 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.26■□□□□ 0.51
Rfx3P48381 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx3P48381 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx3P48381 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx3P48381 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx3P48381 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx3P48381 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx3P48381 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx3P48381 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfx3P48381 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx3P48381 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rfx3P48381 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx3P48381 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rfx3P48381 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rfx3P48381 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx3P48381 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx3P48381 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx3P48381 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx3P48381 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rfx3P48381 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
Rfx3P48381 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx3P48381 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.24■□□□□ 0.51
Rfx3P48381 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rfx3P48381 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.23■□□□□ 0.51
Rfx3P48381 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx3P48381 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rfx3P48381 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Rfx3P48381 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfx3P48381 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx3P48381 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx3P48381 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfx3P48381 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfx3P48381 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rfx3P48381 Gm10232-201ENSMUST00000089221 720 ntBASIC18.21■□□□□ 0.51
Rfx3P48381 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx3P48381 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfx3P48381 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx3P48381 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rfx3P48381 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfx3P48381 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx3P48381 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx3P48381 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx3P48381 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfx3P48381 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms