Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TgfaP48030 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.72■□□□□ 0.43
TgfaP48030 Gm10033-202ENSMUST00000211874 928 ntBASIC17.72■□□□□ 0.43
TgfaP48030 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TgfaP48030 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TgfaP48030 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TgfaP48030 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TgfaP48030 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TgfaP48030 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TgfaP48030 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TgfaP48030 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TgfaP48030 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
TgfaP48030 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TgfaP48030 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TgfaP48030 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.7■□□□□ 0.42
TgfaP48030 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.7■□□□□ 0.42
TgfaP48030 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TgfaP48030 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TgfaP48030 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TgfaP48030 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TgfaP48030 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TgfaP48030 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TgfaP48030 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
TgfaP48030 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TgfaP48030 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TgfaP48030 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TgfaP48030 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.69■□□□□ 0.42
TgfaP48030 Gm11421-201ENSMUST00000122124 294 ntBASIC17.69■□□□□ 0.42
TgfaP48030 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Gm10602-201ENSMUST00000098239 609 ntBASIC17.69■□□□□ 0.42
TgfaP48030 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TgfaP48030 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.69■□□□□ 0.42
TgfaP48030 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TgfaP48030 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TgfaP48030 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TgfaP48030 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TgfaP48030 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TgfaP48030 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TgfaP48030 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TgfaP48030 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TgfaP48030 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TgfaP48030 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.67■□□□□ 0.42
TgfaP48030 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TgfaP48030 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TgfaP48030 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TgfaP48030 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TgfaP48030 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TgfaP48030 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.66■□□□□ 0.42
TgfaP48030 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TgfaP48030 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TgfaP48030 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.66■□□□□ 0.42
TgfaP48030 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.65■□□□□ 0.42
TgfaP48030 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TgfaP48030 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.65■□□□□ 0.42
TgfaP48030 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TgfaP48030 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.65■□□□□ 0.42
TgfaP48030 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TgfaP48030 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TgfaP48030 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.65■□□□□ 0.42
TgfaP48030 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TgfaP48030 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TgfaP48030 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TgfaP48030 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TgfaP48030 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TgfaP48030 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TgfaP48030 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
TgfaP48030 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TgfaP48030 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.64■□□□□ 0.41
TgfaP48030 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.64■□□□□ 0.41
TgfaP48030 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TgfaP48030 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TgfaP48030 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.64■□□□□ 0.41
TgfaP48030 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TgfaP48030 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TgfaP48030 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TgfaP48030 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TgfaP48030 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TgfaP48030 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.64■□□□□ 0.41
TgfaP48030 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TgfaP48030 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TgfaP48030 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms