Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rplp1P47955 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rplp1P47955 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rplp1P47955 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.59■□□□□ 0.25
Rplp1P47955 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.58■□□□□ 0.25
Rplp1P47955 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rplp1P47955 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rplp1P47955 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rplp1P47955 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rplp1P47955 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.58■□□□□ 0.24
Rplp1P47955 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rplp1P47955 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rplp1P47955 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rplp1P47955 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.58■□□□□ 0.24
Rplp1P47955 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rplp1P47955 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rplp1P47955 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rplp1P47955 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Rplp1P47955 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rplp1P47955 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rplp1P47955 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.57■□□□□ 0.24
Rplp1P47955 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.57■□□□□ 0.24
Rplp1P47955 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.57■□□□□ 0.24
Rplp1P47955 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rplp1P47955 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rplp1P47955 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rplp1P47955 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rplp1P47955 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rplp1P47955 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.56■□□□□ 0.24
Rplp1P47955 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rplp1P47955 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rplp1P47955 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rplp1P47955 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rplp1P47955 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rplp1P47955 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rplp1P47955 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rplp1P47955 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rplp1P47955 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Rplp1P47955 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rplp1P47955 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rplp1P47955 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Rplp1P47955 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.55■□□□□ 0.24
Rplp1P47955 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.55■□□□□ 0.24
Rplp1P47955 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.55■□□□□ 0.24
Rplp1P47955 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.55■□□□□ 0.24
Rplp1P47955 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rplp1P47955 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.55■□□□□ 0.24
Rplp1P47955 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rplp1P47955 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rplp1P47955 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rplp1P47955 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rplp1P47955 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rplp1P47955 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rplp1P47955 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.54■□□□□ 0.24
Rplp1P47955 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rplp1P47955 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rplp1P47955 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rplp1P47955 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rplp1P47955 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Rplp1P47955 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
Rplp1P47955 Gm22238-201ENSMUST00000175222 88 ntBASIC16.53■□□□□ 0.24
Rplp1P47955 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Rplp1P47955 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rplp1P47955 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rplp1P47955 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rplp1P47955 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rplp1P47955 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
Rplp1P47955 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.52■□□□□ 0.24
Rplp1P47955 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rplp1P47955 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rplp1P47955 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rplp1P47955 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rplp1P47955 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rplp1P47955 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rplp1P47955 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rplp1P47955 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.52■□□□□ 0.23
Rplp1P47955 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rplp1P47955 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rplp1P47955 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rplp1P47955 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rplp1P47955 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms