Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gli1P47806 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gli1P47806 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gli1P47806 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gli1P47806 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gli1P47806 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.71■□□□□ 0.75
Gli1P47806 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.71■□□□□ 0.75
Gli1P47806 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Gli1P47806 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gli1P47806 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Gli1P47806 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli1P47806 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli1P47806 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli1P47806 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gli1P47806 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli1P47806 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli1P47806 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli1P47806 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gli1P47806 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli1P47806 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli1P47806 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.69■□□□□ 0.74
Gli1P47806 Gm7417-201ENSMUST00000192950 473 ntBASIC19.69■□□□□ 0.74
Gli1P47806 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gli1P47806 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli1P47806 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gli1P47806 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli1P47806 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli1P47806 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli1P47806 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.68■□□□□ 0.74
Gli1P47806 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gli1P47806 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli1P47806 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli1P47806 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gli1P47806 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli1P47806 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Gli1P47806 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli1P47806 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli1P47806 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Gli1P47806 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.67■□□□□ 0.74
Gli1P47806 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli1P47806 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gli1P47806 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gli1P47806 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.67■□□□□ 0.74
Gli1P47806 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Gli1P47806 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Gli1P47806 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.66■□□□□ 0.74
Gli1P47806 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.66■□□□□ 0.74
Gli1P47806 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gli1P47806 Iqck-206ENSMUST00000208658 2891 ntBASIC19.66■□□□□ 0.74
Gli1P47806 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.65■□□□□ 0.74
Gli1P47806 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gli1P47806 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gli1P47806 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Gli1P47806 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gli1P47806 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gli1P47806 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gli1P47806 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.65■□□□□ 0.74
Gli1P47806 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gli1P47806 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gli1P47806 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gli1P47806 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gli1P47806 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gli1P47806 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.64■□□□□ 0.73
Gli1P47806 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Gli1P47806 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Gli1P47806 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gli1P47806 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gli1P47806 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Gli1P47806 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms