Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LdlrP35951 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LdlrP35951 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.2■□□□□ 0.82
LdlrP35951 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LdlrP35951 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LdlrP35951 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LdlrP35951 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LdlrP35951 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LdlrP35951 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LdlrP35951 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LdlrP35951 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LdlrP35951 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LdlrP35951 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LdlrP35951 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.19■□□□□ 0.82
LdlrP35951 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LdlrP35951 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LdlrP35951 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LdlrP35951 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LdlrP35951 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LdlrP35951 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LdlrP35951 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LdlrP35951 Gm10232-201ENSMUST00000089221 720 ntBASIC20.18■□□□□ 0.82
LdlrP35951 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.18■□□□□ 0.82
LdlrP35951 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LdlrP35951 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LdlrP35951 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.18■□□□□ 0.82
LdlrP35951 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LdlrP35951 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LdlrP35951 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LdlrP35951 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LdlrP35951 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.17■□□□□ 0.82
LdlrP35951 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LdlrP35951 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
LdlrP35951 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LdlrP35951 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.16■□□□□ 0.82
LdlrP35951 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.16■□□□□ 0.82
LdlrP35951 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
LdlrP35951 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
LdlrP35951 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.16■□□□□ 0.82
LdlrP35951 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LdlrP35951 Golph3-202ENSMUST00000226517 2359 ntBASIC20.16■□□□□ 0.82
LdlrP35951 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.16■□□□□ 0.82
LdlrP35951 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LdlrP35951 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LdlrP35951 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LdlrP35951 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.15■□□□□ 0.82
LdlrP35951 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LdlrP35951 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LdlrP35951 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
LdlrP35951 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LdlrP35951 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LdlrP35951 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LdlrP35951 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LdlrP35951 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LdlrP35951 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LdlrP35951 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LdlrP35951 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LdlrP35951 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LdlrP35951 Etf1-202ENSMUST00000180351 108 ntBASIC20.14■□□□□ 0.81
LdlrP35951 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LdlrP35951 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.14■□□□□ 0.81
LdlrP35951 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LdlrP35951 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LdlrP35951 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LdlrP35951 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.13■□□□□ 0.81
LdlrP35951 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LdlrP35951 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LdlrP35951 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LdlrP35951 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LdlrP35951 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LdlrP35951 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LdlrP35951 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LdlrP35951 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LdlrP35951 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LdlrP35951 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.12■□□□□ 0.81
LdlrP35951 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LdlrP35951 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LdlrP35951 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LdlrP35951 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LdlrP35951 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LdlrP35951 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LdlrP35951 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LdlrP35951 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LdlrP35951 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LdlrP35951 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LdlrP35951 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LdlrP35951 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LdlrP35951 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LdlrP35951 Iqck-206ENSMUST00000208658 2891 ntBASIC20.11■□□□□ 0.81
LdlrP35951 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms