Protein–RNA interactions for Protein: P29341

Pabpc1, Polyadenylate-binding protein 1, mousemouse

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc1P29341 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pabpc1P29341 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pabpc1P29341 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pabpc1P29341 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pabpc1P29341 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.68■□□□□ 0.9
Pabpc1P29341 Gm43530-201ENSMUST00000195920 274 ntBASIC20.68■□□□□ 0.9
Pabpc1P29341 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.68■□□□□ 0.9
Pabpc1P29341 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pabpc1P29341 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pabpc1P29341 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.68■□□□□ 0.9
Pabpc1P29341 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.68■□□□□ 0.9
Pabpc1P29341 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pabpc1P29341 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pabpc1P29341 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Pabpc1P29341 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pabpc1P29341 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pabpc1P29341 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pabpc1P29341 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pabpc1P29341 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pabpc1P29341 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pabpc1P29341 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pabpc1P29341 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pabpc1P29341 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pabpc1P29341 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Pabpc1P29341 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.66■□□□□ 0.9
Pabpc1P29341 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.66■□□□□ 0.9
Pabpc1P29341 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pabpc1P29341 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Pabpc1P29341 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pabpc1P29341 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pabpc1P29341 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pabpc1P29341 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pabpc1P29341 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.65■□□□□ 0.9
Pabpc1P29341 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pabpc1P29341 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pabpc1P29341 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.64■□□□□ 0.89
Pabpc1P29341 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.64■□□□□ 0.89
Pabpc1P29341 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pabpc1P29341 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pabpc1P29341 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pabpc1P29341 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc1P29341 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc1P29341 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc1P29341 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.63■□□□□ 0.89
Pabpc1P29341 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc1P29341 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.63■□□□□ 0.89
Pabpc1P29341 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc1P29341 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pabpc1P29341 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pabpc1P29341 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pabpc1P29341 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pabpc1P29341 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pabpc1P29341 Serp2-204ENSMUST00000228055 705 ntBASIC20.62■□□□□ 0.89
Pabpc1P29341 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pabpc1P29341 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pabpc1P29341 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pabpc1P29341 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pabpc1P29341 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc1P29341 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc1P29341 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc1P29341 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc1P29341 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pabpc1P29341 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.61■□□□□ 0.89
Pabpc1P29341 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pabpc1P29341 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc1P29341 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pabpc1P29341 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pabpc1P29341 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pabpc1P29341 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pabpc1P29341 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.6■□□□□ 0.89
Pabpc1P29341 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pabpc1P29341 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pabpc1P29341 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pabpc1P29341 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.59■□□□□ 0.89
Pabpc1P29341 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.59■□□□□ 0.89
Pabpc1P29341 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pabpc1P29341 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pabpc1P29341 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pabpc1P29341 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pabpc1P29341 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pabpc1P29341 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pabpc1P29341 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Pabpc1P29341 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.58■□□□□ 0.89
Pabpc1P29341 Mir7075-201ENSMUST00000184187 82 ntBASIC20.58■□□□□ 0.89
Pabpc1P29341 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.58■□□□□ 0.89
Pabpc1P29341 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pabpc1P29341 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.58■□□□□ 0.88
Pabpc1P29341 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Pabpc1P29341 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pabpc1P29341 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pabpc1P29341 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc1P29341 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.57■□□□□ 0.88
Pabpc1P29341 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.57■□□□□ 0.88
Pabpc1P29341 Gm6139-201ENSMUST00000079261 882 ntBASIC20.57■□□□□ 0.88
Pabpc1P29341 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc1P29341 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc1P29341 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc1P29341 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pabpc1P29341 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pabpc1P29341 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms