Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BgnP28653 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.82■□□□□ 0.6
BgnP28653 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BgnP28653 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BgnP28653 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BgnP28653 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BgnP28653 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BgnP28653 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BgnP28653 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BgnP28653 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BgnP28653 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BgnP28653 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BgnP28653 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BgnP28653 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
BgnP28653 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Gm6311-201ENSMUST00000073790 878 ntBASIC18.8■□□□□ 0.6
BgnP28653 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.8■□□□□ 0.6
BgnP28653 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BgnP28653 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.8■□□□□ 0.6
BgnP28653 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BgnP28653 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.79■□□□□ 0.6
BgnP28653 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.79■□□□□ 0.6
BgnP28653 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.79■□□□□ 0.6
BgnP28653 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BgnP28653 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BgnP28653 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
BgnP28653 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BgnP28653 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BgnP28653 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BgnP28653 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BgnP28653 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BgnP28653 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.78■□□□□ 0.6
BgnP28653 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.78■□□□□ 0.6
BgnP28653 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.78■□□□□ 0.6
BgnP28653 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BgnP28653 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BgnP28653 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BgnP28653 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BgnP28653 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BgnP28653 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
BgnP28653 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BgnP28653 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BgnP28653 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BgnP28653 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BgnP28653 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BgnP28653 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BgnP28653 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BgnP28653 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BgnP28653 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BgnP28653 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.76■□□□□ 0.59
BgnP28653 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.76■□□□□ 0.59
BgnP28653 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BgnP28653 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BgnP28653 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BgnP28653 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BgnP28653 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BgnP28653 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
BgnP28653 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BgnP28653 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.75■□□□□ 0.59
BgnP28653 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
BgnP28653 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BgnP28653 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BgnP28653 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BgnP28653 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.74■□□□□ 0.59
BgnP28653 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BgnP28653 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BgnP28653 Gm16437-201ENSMUST00000025669 507 ntBASIC18.74■□□□□ 0.59
BgnP28653 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BgnP28653 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
BgnP28653 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BgnP28653 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BgnP28653 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BgnP28653 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BgnP28653 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BgnP28653 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BgnP28653 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BgnP28653 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BgnP28653 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BgnP28653 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BgnP28653 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.73■□□□□ 0.59
BgnP28653 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BgnP28653 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BgnP28653 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BgnP28653 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BgnP28653 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
BgnP28653 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BgnP28653 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BgnP28653 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BgnP28653 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BgnP28653 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
BgnP28653 Scarna2-201ENSMUST00000157560 414 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms