Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.44■□□□□ 0.54
Cd40P27512 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd40P27512 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cd40P27512 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Cd40P27512 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cd40P27512 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Cd40P27512 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd40P27512 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.42■□□□□ 0.54
Cd40P27512 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd40P27512 Gm43530-201ENSMUST00000195920 274 ntBASIC18.42■□□□□ 0.54
Cd40P27512 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd40P27512 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd40P27512 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cd40P27512 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd40P27512 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd40P27512 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cd40P27512 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd40P27512 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cd40P27512 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cd40P27512 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.41■□□□□ 0.54
Cd40P27512 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.41■□□□□ 0.54
Cd40P27512 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd40P27512 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd40P27512 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cd40P27512 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd40P27512 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd40P27512 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.4■□□□□ 0.54
Cd40P27512 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.4■□□□□ 0.54
Cd40P27512 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd40P27512 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd40P27512 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd40P27512 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cd40P27512 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd40P27512 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cd40P27512 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd40P27512 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd40P27512 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd40P27512 Gm12922-201ENSMUST00000120626 809 ntBASIC18.39■□□□□ 0.53
Cd40P27512 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd40P27512 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cd40P27512 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd40P27512 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd40P27512 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd40P27512 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd40P27512 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cd40P27512 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd40P27512 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd40P27512 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.38■□□□□ 0.53
Cd40P27512 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.38■□□□□ 0.53
Cd40P27512 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd40P27512 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd40P27512 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd40P27512 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd40P27512 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd40P27512 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd40P27512 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cd40P27512 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd40P27512 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd40P27512 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd40P27512 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd40P27512 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.37■□□□□ 0.53
Cd40P27512 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd40P27512 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd40P27512 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd40P27512 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd40P27512 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd40P27512 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.36■□□□□ 0.53
Cd40P27512 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.36■□□□□ 0.53
Cd40P27512 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd40P27512 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd40P27512 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd40P27512 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd40P27512 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd40P27512 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd40P27512 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cd40P27512 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd40P27512 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd40P27512 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.35■□□□□ 0.53
Cd40P27512 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd40P27512 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.35■□□□□ 0.53
Cd40P27512 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.35■□□□□ 0.53
Cd40P27512 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cd40P27512 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms