Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cbx3P23198 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.34■□□□□ 0.53
Cbx3P23198 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx3P23198 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx3P23198 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Cbx3P23198 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cbx3P23198 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx3P23198 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx3P23198 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx3P23198 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx3P23198 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cbx3P23198 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.32■□□□□ 0.52
Cbx3P23198 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cbx3P23198 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Cbx3P23198 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cbx3P23198 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cbx3P23198 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx3P23198 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx3P23198 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx3P23198 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx3P23198 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.31■□□□□ 0.52
Cbx3P23198 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.31■□□□□ 0.52
Cbx3P23198 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx3P23198 Gm22567-201ENSMUST00000175542 342 ntBASIC18.31■□□□□ 0.52
Cbx3P23198 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.31■□□□□ 0.52
Cbx3P23198 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cbx3P23198 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Cbx3P23198 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx3P23198 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx3P23198 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.31■□□□□ 0.52
Cbx3P23198 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cbx3P23198 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx3P23198 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cbx3P23198 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cbx3P23198 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 Gm11599-201ENSMUST00000118720 878 ntBASIC18.3■□□□□ 0.52
Cbx3P23198 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cbx3P23198 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cbx3P23198 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cbx3P23198 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cbx3P23198 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cbx3P23198 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cbx3P23198 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cbx3P23198 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cbx3P23198 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cbx3P23198 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cbx3P23198 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cbx3P23198 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cbx3P23198 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cbx3P23198 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cbx3P23198 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cbx3P23198 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cbx3P23198 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cbx3P23198 Mir3960-201ENSMUST00000198213 73 ntBASIC18.28■□□□□ 0.52
Cbx3P23198 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.28■□□□□ 0.52
Cbx3P23198 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cbx3P23198 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cbx3P23198 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cbx3P23198 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cbx3P23198 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cbx3P23198 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.27■□□□□ 0.52
Cbx3P23198 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.27■□□□□ 0.52
Cbx3P23198 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.27■□□□□ 0.51
Cbx3P23198 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cbx3P23198 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cbx3P23198 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cbx3P23198 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cbx3P23198 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.26■□□□□ 0.51
Cbx3P23198 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cbx3P23198 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cbx3P23198 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cbx3P23198 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cbx3P23198 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cbx3P23198 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms