Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf9P20334 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Gm43137-201ENSMUST00000198052 594 ntBASIC16.36■□□□□ 0.21
Tnfrsf9P20334 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf9P20334 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.35■□□□□ 0.21
Tnfrsf9P20334 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.35■□□□□ 0.21
Tnfrsf9P20334 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tnfrsf9P20334 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf9P20334 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf9P20334 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnfrsf9P20334 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnfrsf9P20334 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Tnfrsf9P20334 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Tnfrsf9P20334 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tnfrsf9P20334 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Mir7075-201ENSMUST00000184187 82 ntBASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Tnfrsf9P20334 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf9P20334 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Gm5874-201ENSMUST00000096101 508 ntBASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf9P20334 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf9P20334 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms