Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Fn1P11276 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Fn1P11276 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Fn1P11276 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Fn1P11276 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Fn1P11276 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Fn1P11276 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Fn1P11276 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Fn1P11276 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Fn1P11276 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Fn1P11276 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.96■□□□□ 0.15
Fn1P11276 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Fn1P11276 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Fn1P11276 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Fn1P11276 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Fn1P11276 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.96■□□□□ 0.15
Fn1P11276 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Fn1P11276 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Fn1P11276 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Fn1P11276 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.95■□□□□ 0.14
Fn1P11276 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Fn1P11276 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Fn1P11276 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.95■□□□□ 0.14
Fn1P11276 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Fn1P11276 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
Fn1P11276 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.94■□□□□ 0.14
Fn1P11276 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Fn1P11276 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Fn1P11276 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Fn1P11276 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Fn1P11276 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Fn1P11276 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.94■□□□□ 0.14
Fn1P11276 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Fn1P11276 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Fn1P11276 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Fn1P11276 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Fn1P11276 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Fn1P11276 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Fn1P11276 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Fn1P11276 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.93■□□□□ 0.14
Fn1P11276 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Fn1P11276 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Fn1P11276 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Fn1P11276 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Fn1P11276 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Fn1P11276 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Fn1P11276 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fn1P11276 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fn1P11276 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fn1P11276 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fn1P11276 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fn1P11276 Gm9988-201ENSMUST00000069786 435 ntBASIC15.92■□□□□ 0.14
Fn1P11276 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fn1P11276 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Fn1P11276 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fn1P11276 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Fn1P11276 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Fn1P11276 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.92■□□□□ 0.14
Fn1P11276 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Fn1P11276 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.92■□□□□ 0.14
Fn1P11276 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Fn1P11276 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.91■□□□□ 0.14
Fn1P11276 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fn1P11276 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fn1P11276 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fn1P11276 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fn1P11276 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fn1P11276 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.91■□□□□ 0.14
Fn1P11276 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Fn1P11276 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fn1P11276 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fn1P11276 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fn1P11276 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fn1P11276 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fn1P11276 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fn1P11276 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fn1P11276 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Fn1P11276 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.9■□□□□ 0.14
Fn1P11276 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Fn1P11276 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fn1P11276 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fn1P11276 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fn1P11276 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fn1P11276 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.89■□□□□ 0.13
Fn1P11276 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fn1P11276 Gm5408-201ENSMUST00000197998 747 ntBASIC15.89■□□□□ 0.13
Fn1P11276 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fn1P11276 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.88■□□□□ 0.13
Fn1P11276 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Fn1P11276 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms