Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ifna1P01572 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ifna1P01572 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ifna1P01572 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ifna1P01572 Iqck-206ENSMUST00000208658 2891 ntBASIC17.1■□□□□ 0.33
Ifna1P01572 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ifna1P01572 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ifna1P01572 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ifna1P01572 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ifna1P01572 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ifna1P01572 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ifna1P01572 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ifna1P01572 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ifna1P01572 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ifna1P01572 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ifna1P01572 Golph3-202ENSMUST00000226517 2359 ntBASIC17.09■□□□□ 0.33
Ifna1P01572 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.09■□□□□ 0.33
Ifna1P01572 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ifna1P01572 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.09■□□□□ 0.33
Ifna1P01572 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ifna1P01572 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ifna1P01572 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ifna1P01572 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Ifna1P01572 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ifna1P01572 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ifna1P01572 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ifna1P01572 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ifna1P01572 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ifna1P01572 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.08■□□□□ 0.33
Ifna1P01572 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ifna1P01572 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.08■□□□□ 0.32
Ifna1P01572 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ifna1P01572 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ifna1P01572 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ifna1P01572 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ifna1P01572 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ifna1P01572 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.07■□□□□ 0.32
Ifna1P01572 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ifna1P01572 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ifna1P01572 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ifna1P01572 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.07■□□□□ 0.32
Ifna1P01572 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.07■□□□□ 0.32
Ifna1P01572 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ifna1P01572 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ifna1P01572 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ifna1P01572 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ifna1P01572 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ifna1P01572 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ifna1P01572 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ifna1P01572 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ifna1P01572 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ifna1P01572 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ifna1P01572 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 Gm7332-201ENSMUST00000118351 454 ntBASIC17.05■□□□□ 0.32
Ifna1P01572 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.05■□□□□ 0.32
Ifna1P01572 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.05■□□□□ 0.32
Ifna1P01572 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.05■□□□□ 0.32
Ifna1P01572 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Ifna1P01572 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.05■□□□□ 0.32
Ifna1P01572 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ifna1P01572 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ifna1P01572 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ifna1P01572 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ifna1P01572 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ifna1P01572 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ifna1P01572 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ifna1P01572 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ifna1P01572 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ifna1P01572 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ifna1P01572 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ifna1P01572 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ifna1P01572 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ifna1P01572 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ifna1P01572 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ifna1P01572 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ifna1P01572 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ifna1P01572 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ifna1P01572 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ifna1P01572 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ifna1P01572 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ifna1P01572 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ifna1P01572 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms