Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.07■□□□□ 0.48
Hdac3O88895 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hdac3O88895 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac3O88895 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Hdac3O88895 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hdac3O88895 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.06■□□□□ 0.48
Hdac3O88895 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.06■□□□□ 0.48
Hdac3O88895 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Hdac3O88895 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Hdac3O88895 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac3O88895 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac3O88895 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hdac3O88895 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac3O88895 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac3O88895 Iqck-206ENSMUST00000208658 2891 ntBASIC18.05■□□□□ 0.48
Hdac3O88895 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac3O88895 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.04■□□□□ 0.48
Hdac3O88895 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac3O88895 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac3O88895 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.04■□□□□ 0.48
Hdac3O88895 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.04■□□□□ 0.48
Hdac3O88895 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.04■□□□□ 0.48
Hdac3O88895 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Hdac3O88895 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac3O88895 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac3O88895 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac3O88895 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac3O88895 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac3O88895 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac3O88895 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.03■□□□□ 0.48
Hdac3O88895 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.03■□□□□ 0.48
Hdac3O88895 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac3O88895 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.03■□□□□ 0.48
Hdac3O88895 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac3O88895 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac3O88895 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac3O88895 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac3O88895 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac3O88895 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hdac3O88895 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac3O88895 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac3O88895 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.02■□□□□ 0.48
Hdac3O88895 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.02■□□□□ 0.48
Hdac3O88895 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.02■□□□□ 0.48
Hdac3O88895 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hdac3O88895 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hdac3O88895 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hdac3O88895 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hdac3O88895 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hdac3O88895 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hdac3O88895 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Hdac3O88895 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Hdac3O88895 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hdac3O88895 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hdac3O88895 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac3O88895 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac3O88895 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac3O88895 Gm15546-201ENSMUST00000122095 826 ntBASIC18.01■□□□□ 0.47
Hdac3O88895 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.01■□□□□ 0.47
Hdac3O88895 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac3O88895 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hdac3O88895 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Hdac3O88895 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.01■□□□□ 0.47
Hdac3O88895 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac3O88895 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac3O88895 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac3O88895 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac3O88895 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac3O88895 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hdac3O88895 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hdac3O88895 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hdac3O88895 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac3O88895 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac3O88895 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac3O88895 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Hdac3O88895 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
Hdac3O88895 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hdac3O88895 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac3O88895 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.98■□□□□ 0.47
Hdac3O88895 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hdac3O88895 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms