Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pknox1O70477 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pknox1O70477 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pknox1O70477 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pknox1O70477 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Pknox1O70477 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pknox1O70477 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pknox1O70477 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pknox1O70477 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pknox1O70477 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pknox1O70477 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pknox1O70477 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pknox1O70477 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pknox1O70477 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pknox1O70477 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pknox1O70477 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pknox1O70477 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pknox1O70477 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pknox1O70477 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pknox1O70477 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pknox1O70477 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Pknox1O70477 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pknox1O70477 Gm10399-202ENSMUST00000202768 748 ntBASIC20.15■□□□□ 0.82
Pknox1O70477 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pknox1O70477 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pknox1O70477 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pknox1O70477 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pknox1O70477 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pknox1O70477 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pknox1O70477 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pknox1O70477 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pknox1O70477 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pknox1O70477 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pknox1O70477 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.14■□□□□ 0.81
Pknox1O70477 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.14■□□□□ 0.81
Pknox1O70477 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pknox1O70477 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pknox1O70477 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.14■□□□□ 0.81
Pknox1O70477 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.14■□□□□ 0.81
Pknox1O70477 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
Pknox1O70477 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pknox1O70477 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pknox1O70477 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pknox1O70477 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pknox1O70477 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pknox1O70477 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pknox1O70477 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pknox1O70477 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pknox1O70477 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Pknox1O70477 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pknox1O70477 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pknox1O70477 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.12■□□□□ 0.81
Pknox1O70477 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pknox1O70477 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pknox1O70477 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pknox1O70477 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pknox1O70477 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pknox1O70477 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pknox1O70477 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pknox1O70477 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Pknox1O70477 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pknox1O70477 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pknox1O70477 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pknox1O70477 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pknox1O70477 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pknox1O70477 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pknox1O70477 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pknox1O70477 Gm10232-201ENSMUST00000089221 720 ntBASIC20.1■□□□□ 0.81
Pknox1O70477 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pknox1O70477 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Pknox1O70477 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pknox1O70477 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pknox1O70477 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pknox1O70477 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.09■□□□□ 0.81
Pknox1O70477 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pknox1O70477 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pknox1O70477 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pknox1O70477 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pknox1O70477 Golph3-202ENSMUST00000226517 2359 ntBASIC20.08■□□□□ 0.81
Pknox1O70477 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pknox1O70477 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pknox1O70477 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pknox1O70477 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pknox1O70477 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pknox1O70477 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.08■□□□□ 0.81
Pknox1O70477 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pknox1O70477 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pknox1O70477 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pknox1O70477 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Pknox1O70477 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pknox1O70477 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pknox1O70477 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pknox1O70477 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pknox1O70477 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.07■□□□□ 0.8
Pknox1O70477 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pknox1O70477 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pknox1O70477 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pknox1O70477 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pknox1O70477 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms