Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.42■□□□□ 0.54
Pdlim3O70209 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.42■□□□□ 0.54
Pdlim3O70209 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim3O70209 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim3O70209 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim3O70209 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim3O70209 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim3O70209 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pdlim3O70209 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.4■□□□□ 0.54
Pdlim3O70209 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Pdlim3O70209 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim3O70209 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pdlim3O70209 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.39■□□□□ 0.54
Pdlim3O70209 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim3O70209 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim3O70209 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim3O70209 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim3O70209 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim3O70209 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim3O70209 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pdlim3O70209 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim3O70209 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pdlim3O70209 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim3O70209 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pdlim3O70209 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim3O70209 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim3O70209 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim3O70209 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim3O70209 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pdlim3O70209 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim3O70209 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim3O70209 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim3O70209 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.37■□□□□ 0.53
Pdlim3O70209 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim3O70209 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pdlim3O70209 Gm11175-201ENSMUST00000116172 543 ntBASIC18.36■□□□□ 0.53
Pdlim3O70209 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim3O70209 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim3O70209 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim3O70209 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim3O70209 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pdlim3O70209 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pdlim3O70209 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim3O70209 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim3O70209 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim3O70209 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pdlim3O70209 Gm10420-201ENSMUST00000121713 882 ntBASIC18.35■□□□□ 0.53
Pdlim3O70209 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.35■□□□□ 0.53
Pdlim3O70209 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim3O70209 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim3O70209 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim3O70209 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim3O70209 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim3O70209 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim3O70209 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim3O70209 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.34■□□□□ 0.53
Pdlim3O70209 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pdlim3O70209 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim3O70209 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim3O70209 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim3O70209 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.34■□□□□ 0.53
Pdlim3O70209 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim3O70209 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim3O70209 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.33■□□□□ 0.53
Pdlim3O70209 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim3O70209 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Pdlim3O70209 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pdlim3O70209 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.33■□□□□ 0.53
Pdlim3O70209 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.33■□□□□ 0.52
Pdlim3O70209 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim3O70209 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.33■□□□□ 0.52
Pdlim3O70209 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms