Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Limk2O54785 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Limk2O54785 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Limk2O54785 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Limk2O54785 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Limk2O54785 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Limk2O54785 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.65■□□□□ 0.9
Limk2O54785 Gm9870-201ENSMUST00000063874 645 ntBASIC20.65■□□□□ 0.9
Limk2O54785 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Limk2O54785 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Limk2O54785 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Limk2O54785 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.64■□□□□ 0.9
Limk2O54785 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.64■□□□□ 0.9
Limk2O54785 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Limk2O54785 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.64■□□□□ 0.89
Limk2O54785 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.64■□□□□ 0.89
Limk2O54785 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Limk2O54785 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Limk2O54785 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Limk2O54785 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Limk2O54785 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Limk2O54785 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Limk2O54785 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Limk2O54785 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Limk2O54785 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Limk2O54785 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Limk2O54785 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Limk2O54785 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Limk2O54785 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Limk2O54785 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Limk2O54785 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.62■□□□□ 0.89
Limk2O54785 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Limk2O54785 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Limk2O54785 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Limk2O54785 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.61■□□□□ 0.89
Limk2O54785 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Limk2O54785 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Limk2O54785 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.61■□□□□ 0.89
Limk2O54785 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
Limk2O54785 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.61■□□□□ 0.89
Limk2O54785 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Limk2O54785 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Limk2O54785 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Limk2O54785 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Limk2O54785 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Limk2O54785 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Limk2O54785 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Limk2O54785 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Limk2O54785 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Limk2O54785 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Limk2O54785 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Limk2O54785 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Limk2O54785 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Limk2O54785 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Limk2O54785 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.59■□□□□ 0.89
Limk2O54785 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Limk2O54785 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Limk2O54785 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Limk2O54785 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.59■□□□□ 0.89
Limk2O54785 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Limk2O54785 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Limk2O54785 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Limk2O54785 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Limk2O54785 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Limk2O54785 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Limk2O54785 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.58■□□□□ 0.88
Limk2O54785 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Limk2O54785 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Limk2O54785 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Limk2O54785 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Limk2O54785 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Limk2O54785 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Limk2O54785 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Limk2O54785 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Limk2O54785 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Limk2O54785 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Limk2O54785 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Limk2O54785 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.56■□□□□ 0.88
Limk2O54785 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.56■□□□□ 0.88
Limk2O54785 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Limk2O54785 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Limk2O54785 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Limk2O54785 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Limk2O54785 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Limk2O54785 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.55■□□□□ 0.88
Limk2O54785 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.55■□□□□ 0.88
Limk2O54785 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.55■□□□□ 0.88
Limk2O54785 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Limk2O54785 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Limk2O54785 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Limk2O54785 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms