Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1i3O35627 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1i3O35627 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1i3O35627 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1i3O35627 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1i3O35627 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1i3O35627 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.92■■□□□ 1.1
Nr1i3O35627 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1i3O35627 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1i3O35627 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Nr1i3O35627 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Nr1i3O35627 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1i3O35627 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1i3O35627 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1i3O35627 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1i3O35627 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Nr1i3O35627 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Nr1i3O35627 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1i3O35627 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1i3O35627 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Nr1i3O35627 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1i3O35627 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Nr1i3O35627 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1i3O35627 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1i3O35627 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1i3O35627 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1i3O35627 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1i3O35627 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1i3O35627 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.89■■□□□ 1.1
Nr1i3O35627 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nr1i3O35627 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nr1i3O35627 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nr1i3O35627 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nr1i3O35627 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nr1i3O35627 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Nr1i3O35627 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nr1i3O35627 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nr1i3O35627 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Nr1i3O35627 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nr1i3O35627 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.88■■□□□ 1.09
Nr1i3O35627 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Nr1i3O35627 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1i3O35627 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Nr1i3O35627 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1i3O35627 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1i3O35627 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.88■■□□□ 1.09
Nr1i3O35627 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1i3O35627 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1i3O35627 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1i3O35627 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1i3O35627 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1i3O35627 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Nr1i3O35627 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.87■■□□□ 1.09
Nr1i3O35627 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1i3O35627 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1i3O35627 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Nr1i3O35627 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1i3O35627 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1i3O35627 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1i3O35627 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.86■■□□□ 1.09
Nr1i3O35627 Gm7143-201ENSMUST00000222811 859 ntBASIC21.86■■□□□ 1.09
Nr1i3O35627 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1i3O35627 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1i3O35627 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1i3O35627 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Nr1i3O35627 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1i3O35627 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Nr1i3O35627 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.85■■□□□ 1.09
Nr1i3O35627 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1i3O35627 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1i3O35627 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1i3O35627 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Nr1i3O35627 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nr1i3O35627 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1i3O35627 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.84■■□□□ 1.09
Nr1i3O35627 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.84■■□□□ 1.09
Nr1i3O35627 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Nr1i3O35627 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Nr1i3O35627 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.84■■□□□ 1.09
Nr1i3O35627 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1i3O35627 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nr1i3O35627 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nr1i3O35627 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nr1i3O35627 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nr1i3O35627 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nr1i3O35627 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nr1i3O35627 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nr1i3O35627 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nr1i3O35627 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nr1i3O35627 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nr1i3O35627 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Nr1i3O35627 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1i3O35627 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Nr1i3O35627 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.82■■□□□ 1.08
Nr1i3O35627 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1i3O35627 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1i3O35627 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nr1i3O35627 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1i3O35627 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nr1i3O35627 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms