Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Abca4O35600 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abca4O35600 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Abca4O35600 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abca4O35600 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Abca4O35600 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.51■□□□□ 0.71
Abca4O35600 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Abca4O35600 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abca4O35600 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.5■□□□□ 0.71
Abca4O35600 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.5■□□□□ 0.71
Abca4O35600 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.5■□□□□ 0.71
Abca4O35600 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abca4O35600 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.5■□□□□ 0.71
Abca4O35600 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Abca4O35600 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.5■□□□□ 0.71
Abca4O35600 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.5■□□□□ 0.71
Abca4O35600 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.5■□□□□ 0.71
Abca4O35600 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abca4O35600 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abca4O35600 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abca4O35600 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Abca4O35600 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Abca4O35600 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.48■□□□□ 0.71
Abca4O35600 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Abca4O35600 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.48■□□□□ 0.71
Abca4O35600 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Abca4O35600 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.48■□□□□ 0.71
Abca4O35600 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abca4O35600 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Abca4O35600 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Abca4O35600 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Abca4O35600 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Abca4O35600 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Abca4O35600 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Abca4O35600 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.47■□□□□ 0.71
Abca4O35600 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.47■□□□□ 0.71
Abca4O35600 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Abca4O35600 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abca4O35600 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.46■□□□□ 0.71
Abca4O35600 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abca4O35600 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.45■□□□□ 0.7
Abca4O35600 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abca4O35600 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Abca4O35600 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abca4O35600 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Abca4O35600 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Abca4O35600 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abca4O35600 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abca4O35600 Gm7290-201ENSMUST00000104990 617 ntBASIC19.43■□□□□ 0.7
Abca4O35600 Gm12918-201ENSMUST00000120234 636 ntBASIC19.43■□□□□ 0.7
Abca4O35600 Gm15710-201ENSMUST00000121821 636 ntBASIC19.43■□□□□ 0.7
Abca4O35600 Gm5075-201ENSMUST00000196916 622 ntBASIC19.43■□□□□ 0.7
Abca4O35600 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abca4O35600 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.43■□□□□ 0.7
Abca4O35600 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.43■□□□□ 0.7
Abca4O35600 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.43■□□□□ 0.7
Abca4O35600 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abca4O35600 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Abca4O35600 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abca4O35600 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abca4O35600 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Abca4O35600 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Abca4O35600 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abca4O35600 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abca4O35600 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abca4O35600 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Abca4O35600 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.42■□□□□ 0.7
Abca4O35600 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Abca4O35600 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Abca4O35600 Gm5408-201ENSMUST00000197998 747 ntBASIC19.41■□□□□ 0.7
Abca4O35600 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Gm6365-201ENSMUST00000054711 744 ntBASIC19.41■□□□□ 0.7
Abca4O35600 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Abca4O35600 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.41■□□□□ 0.7
Abca4O35600 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.41■□□□□ 0.7
Abca4O35600 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abca4O35600 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abca4O35600 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.4■□□□□ 0.7
Abca4O35600 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.4■□□□□ 0.7
Abca4O35600 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.4■□□□□ 0.7
Abca4O35600 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.4■□□□□ 0.7
Abca4O35600 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Abca4O35600 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Abca4O35600 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abca4O35600 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Abca4O35600 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.39■□□□□ 0.69
Abca4O35600 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abca4O35600 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abca4O35600 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abca4O35600 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms