Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Ercc2O08811 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ercc2O08811 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ercc2O08811 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ercc2O08811 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.82■□□□□ 0.92
Ercc2O08811 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.82■□□□□ 0.92
Ercc2O08811 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ercc2O08811 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ercc2O08811 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ercc2O08811 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ercc2O08811 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ercc2O08811 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.81■□□□□ 0.92
Ercc2O08811 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ercc2O08811 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Ercc2O08811 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ercc2O08811 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ercc2O08811 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ercc2O08811 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ercc2O08811 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
Ercc2O08811 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.8■□□□□ 0.92
Ercc2O08811 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.8■□□□□ 0.92
Ercc2O08811 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.8■□□□□ 0.92
Ercc2O08811 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Ercc2O08811 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ercc2O08811 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.8■□□□□ 0.92
Ercc2O08811 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ercc2O08811 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ercc2O08811 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.79■□□□□ 0.92
Ercc2O08811 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ercc2O08811 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ercc2O08811 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ercc2O08811 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ercc2O08811 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ercc2O08811 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ercc2O08811 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ercc2O08811 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ercc2O08811 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ercc2O08811 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.78■□□□□ 0.92
Ercc2O08811 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.78■□□□□ 0.92
Ercc2O08811 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ercc2O08811 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ercc2O08811 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ercc2O08811 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc2O08811 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ercc2O08811 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ercc2O08811 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ercc2O08811 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ercc2O08811 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ercc2O08811 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc2O08811 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc2O08811 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc2O08811 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc2O08811 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc2O08811 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc2O08811 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc2O08811 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc2O08811 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc2O08811 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ercc2O08811 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ercc2O08811 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc2O08811 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ercc2O08811 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc2O08811 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc2O08811 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms