Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AlyrefO08583 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AlyrefO08583 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AlyrefO08583 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.58■□□□□ 0.89
AlyrefO08583 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.58■□□□□ 0.89
AlyrefO08583 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AlyrefO08583 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AlyrefO08583 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AlyrefO08583 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AlyrefO08583 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.58■□□□□ 0.88
AlyrefO08583 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AlyrefO08583 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AlyrefO08583 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.57■□□□□ 0.88
AlyrefO08583 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.57■□□□□ 0.88
AlyrefO08583 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AlyrefO08583 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
AlyrefO08583 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.57■□□□□ 0.88
AlyrefO08583 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
AlyrefO08583 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AlyrefO08583 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
AlyrefO08583 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.57■□□□□ 0.88
AlyrefO08583 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AlyrefO08583 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
AlyrefO08583 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AlyrefO08583 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AlyrefO08583 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AlyrefO08583 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AlyrefO08583 Gm10812-201ENSMUST00000099864 546 ntBASIC20.56■□□□□ 0.88
AlyrefO08583 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
AlyrefO08583 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
AlyrefO08583 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AlyrefO08583 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.55■□□□□ 0.88
AlyrefO08583 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AlyrefO08583 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AlyrefO08583 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AlyrefO08583 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AlyrefO08583 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AlyrefO08583 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AlyrefO08583 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AlyrefO08583 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AlyrefO08583 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AlyrefO08583 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.54■□□□□ 0.88
AlyrefO08583 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AlyrefO08583 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AlyrefO08583 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AlyrefO08583 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
AlyrefO08583 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AlyrefO08583 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
AlyrefO08583 Gm13168-201ENSMUST00000121771 632 ntBASIC20.53■□□□□ 0.88
AlyrefO08583 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
AlyrefO08583 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AlyrefO08583 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
AlyrefO08583 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
AlyrefO08583 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AlyrefO08583 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AlyrefO08583 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
AlyrefO08583 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AlyrefO08583 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.52■□□□□ 0.88
AlyrefO08583 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AlyrefO08583 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
AlyrefO08583 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
AlyrefO08583 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AlyrefO08583 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.51■□□□□ 0.87
AlyrefO08583 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
AlyrefO08583 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.51■□□□□ 0.87
AlyrefO08583 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.51■□□□□ 0.87
AlyrefO08583 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AlyrefO08583 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AlyrefO08583 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
AlyrefO08583 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AlyrefO08583 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
AlyrefO08583 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
AlyrefO08583 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AlyrefO08583 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AlyrefO08583 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AlyrefO08583 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
AlyrefO08583 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.5■□□□□ 0.87
AlyrefO08583 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AlyrefO08583 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
AlyrefO08583 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AlyrefO08583 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.5■□□□□ 0.87
AlyrefO08583 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AlyrefO08583 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AlyrefO08583 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AlyrefO08583 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
AlyrefO08583 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.49■□□□□ 0.87
AlyrefO08583 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AlyrefO08583 Gm4968-201ENSMUST00000071458 858 ntBASIC20.49■□□□□ 0.87
AlyrefO08583 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
AlyrefO08583 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
AlyrefO08583 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
AlyrefO08583 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
AlyrefO08583 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
AlyrefO08583 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.48■□□□□ 0.87
AlyrefO08583 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AlyrefO08583 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
AlyrefO08583 Gm12527-201ENSMUST00000117967 564 ntBASIC20.48■□□□□ 0.87
AlyrefO08583 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.48■□□□□ 0.87
AlyrefO08583 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
AlyrefO08583 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms