Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm6408J3QNG1 Gm10399-202ENSMUST00000202768 748 ntBASIC20.29■□□□□ 0.84
Gm6408J3QNG1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.29■□□□□ 0.84
Gm6408J3QNG1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm6408J3QNG1 Gm10232-201ENSMUST00000089221 720 ntBASIC20.29■□□□□ 0.84
Gm6408J3QNG1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm6408J3QNG1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm6408J3QNG1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm6408J3QNG1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm6408J3QNG1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm6408J3QNG1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm6408J3QNG1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.28■□□□□ 0.84
Gm6408J3QNG1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm6408J3QNG1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm6408J3QNG1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm6408J3QNG1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.28■□□□□ 0.84
Gm6408J3QNG1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm6408J3QNG1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm6408J3QNG1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Gm6408J3QNG1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm6408J3QNG1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm6408J3QNG1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.24■□□□□ 0.83
Gm6408J3QNG1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm6408J3QNG1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Gm6408J3QNG1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm6408J3QNG1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm6408J3QNG1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm6408J3QNG1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.23■□□□□ 0.83
Gm6408J3QNG1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm6408J3QNG1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm6408J3QNG1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm6408J3QNG1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.21■□□□□ 0.83
Gm6408J3QNG1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm6408J3QNG1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm6408J3QNG1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm6408J3QNG1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.2■□□□□ 0.82
Gm6408J3QNG1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm6408J3QNG1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gm6408J3QNG1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.2■□□□□ 0.82
Gm6408J3QNG1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Gm6408J3QNG1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm6408J3QNG1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm6408J3QNG1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm6408J3QNG1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms