Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh1F7BJK1 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.31■□□□□ 0.52
Pcdh1F7BJK1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh1F7BJK1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh1F7BJK1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh1F7BJK1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh1F7BJK1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdh1F7BJK1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh1F7BJK1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh1F7BJK1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh1F7BJK1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh1F7BJK1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh1F7BJK1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh1F7BJK1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh1F7BJK1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh1F7BJK1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh1F7BJK1 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.29■□□□□ 0.52
Pcdh1F7BJK1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh1F7BJK1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh1F7BJK1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdh1F7BJK1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh1F7BJK1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh1F7BJK1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh1F7BJK1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh1F7BJK1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh1F7BJK1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh1F7BJK1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdh1F7BJK1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh1F7BJK1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh1F7BJK1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh1F7BJK1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Gm10420-201ENSMUST00000121713 882 ntBASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdh1F7BJK1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh1F7BJK1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Pcdh1F7BJK1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Pcdh1F7BJK1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh1F7BJK1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh1F7BJK1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh1F7BJK1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh1F7BJK1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh1F7BJK1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh1F7BJK1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh1F7BJK1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh1F7BJK1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh1F7BJK1 Cap2-205ENSMUST00000225824 1634 ntBASIC18.23■□□□□ 0.51
Pcdh1F7BJK1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh1F7BJK1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh1F7BJK1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.22■□□□□ 0.51
Pcdh1F7BJK1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdh1F7BJK1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh1F7BJK1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh1F7BJK1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh1F7BJK1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh1F7BJK1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh1F7BJK1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh1F7BJK1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms