Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Slc28a1E9PXX9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a1E9PXX9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Slc28a1E9PXX9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a1E9PXX9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a1E9PXX9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a1E9PXX9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc28a1E9PXX9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc28a1E9PXX9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc28a1E9PXX9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc28a1E9PXX9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc28a1E9PXX9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc28a1E9PXX9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc28a1E9PXX9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.14■□□□□ 0.65
Slc28a1E9PXX9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc28a1E9PXX9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a1E9PXX9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a1E9PXX9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a1E9PXX9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a1E9PXX9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a1E9PXX9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Slc28a1E9PXX9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a1E9PXX9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a1E9PXX9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a1E9PXX9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a1E9PXX9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a1E9PXX9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a1E9PXX9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a1E9PXX9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a1E9PXX9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a1E9PXX9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Slc28a1E9PXX9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a1E9PXX9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a1E9PXX9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a1E9PXX9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a1E9PXX9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a1E9PXX9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.11■□□□□ 0.65
Slc28a1E9PXX9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slc28a1E9PXX9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc28a1E9PXX9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc28a1E9PXX9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc28a1E9PXX9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a1E9PXX9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a1E9PXX9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a1E9PXX9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.09■□□□□ 0.65
Slc28a1E9PXX9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a1E9PXX9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Slc28a1E9PXX9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a1E9PXX9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slc28a1E9PXX9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Slc28a1E9PXX9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc28a1E9PXX9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Slc28a1E9PXX9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.08■□□□□ 0.64
Slc28a1E9PXX9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Slc28a1E9PXX9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc28a1E9PXX9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a1E9PXX9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.06■□□□□ 0.64
Slc28a1E9PXX9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a1E9PXX9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a1E9PXX9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a1E9PXX9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a1E9PXX9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc28a1E9PXX9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.06■□□□□ 0.64
Slc28a1E9PXX9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Slc28a1E9PXX9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Slc28a1E9PXX9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.05■□□□□ 0.64
Slc28a1E9PXX9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Slc28a1E9PXX9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc28a1E9PXX9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc28a1E9PXX9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc28a1E9PXX9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc28a1E9PXX9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc28a1E9PXX9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms