Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sptbn4E9PX29 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sptbn4E9PX29 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sptbn4E9PX29 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sptbn4E9PX29 Gm715-201ENSMUST00000117865 831 ntBASIC18.67■□□□□ 0.58
Sptbn4E9PX29 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Sptbn4E9PX29 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sptbn4E9PX29 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.67■□□□□ 0.58
Sptbn4E9PX29 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sptbn4E9PX29 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.66■□□□□ 0.58
Sptbn4E9PX29 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sptbn4E9PX29 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sptbn4E9PX29 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sptbn4E9PX29 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sptbn4E9PX29 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Sptbn4E9PX29 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Sptbn4E9PX29 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sptbn4E9PX29 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sptbn4E9PX29 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sptbn4E9PX29 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sptbn4E9PX29 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sptbn4E9PX29 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sptbn4E9PX29 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sptbn4E9PX29 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sptbn4E9PX29 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sptbn4E9PX29 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sptbn4E9PX29 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Gm9988-201ENSMUST00000069786 435 ntBASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sptbn4E9PX29 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sptbn4E9PX29 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sptbn4E9PX29 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sptbn4E9PX29 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sptbn4E9PX29 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.6■□□□□ 0.57
Sptbn4E9PX29 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sptbn4E9PX29 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sptbn4E9PX29 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sptbn4E9PX29 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sptbn4E9PX29 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sptbn4E9PX29 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.59■□□□□ 0.57
Sptbn4E9PX29 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sptbn4E9PX29 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sptbn4E9PX29 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.58■□□□□ 0.57
Sptbn4E9PX29 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.58■□□□□ 0.57
Sptbn4E9PX29 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.58■□□□□ 0.57
Sptbn4E9PX29 Gm5408-201ENSMUST00000197998 747 ntBASIC18.58■□□□□ 0.57
Sptbn4E9PX29 Gm10819-201ENSMUST00000099988 561 ntBASIC18.58■□□□□ 0.57
Sptbn4E9PX29 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.58■□□□□ 0.56
Sptbn4E9PX29 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sptbn4E9PX29 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sptbn4E9PX29 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms