Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dchs1E9PVD3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.29■□□□□ 0.52
Dchs1E9PVD3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dchs1E9PVD3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dchs1E9PVD3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dchs1E9PVD3 Gm40848-201ENSMUST00000221998 324 ntBASIC18.29■□□□□ 0.52
Dchs1E9PVD3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dchs1E9PVD3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dchs1E9PVD3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Dchs1E9PVD3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dchs1E9PVD3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dchs1E9PVD3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Dchs1E9PVD3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.28■□□□□ 0.52
Dchs1E9PVD3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Dchs1E9PVD3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dchs1E9PVD3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.28■□□□□ 0.52
Dchs1E9PVD3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.28■□□□□ 0.52
Dchs1E9PVD3 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.28■□□□□ 0.52
Dchs1E9PVD3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Dchs1E9PVD3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.27■□□□□ 0.52
Dchs1E9PVD3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Dchs1E9PVD3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dchs1E9PVD3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Dchs1E9PVD3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.27■□□□□ 0.51
Dchs1E9PVD3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.27■□□□□ 0.51
Dchs1E9PVD3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Gm26833-201ENSMUST00000180899 440 ntBASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dchs1E9PVD3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Gm10252-201ENSMUST00000209541 832 ntBASIC18.25■□□□□ 0.51
Dchs1E9PVD3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.24■□□□□ 0.51
Dchs1E9PVD3 AV356131-201ENSMUST00000206201 750 ntBASIC18.24■□□□□ 0.51
Dchs1E9PVD3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Dchs1E9PVD3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Dchs1E9PVD3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dchs1E9PVD3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dchs1E9PVD3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dchs1E9PVD3 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.22■□□□□ 0.51
Dchs1E9PVD3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dchs1E9PVD3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dchs1E9PVD3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dchs1E9PVD3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dchs1E9PVD3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dchs1E9PVD3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.2■□□□□ 0.5
Dchs1E9PVD3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Dchs1E9PVD3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.2■□□□□ 0.5
Dchs1E9PVD3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms