Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hist1h2abC0HKE1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h2abC0HKE1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h2abC0HKE1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h2abC0HKE1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Hist1h2abC0HKE1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hist1h2abC0HKE1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hist1h2abC0HKE1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Hist1h2abC0HKE1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hist1h2abC0HKE1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.52■□□□□ 0.56
Hist1h2abC0HKE1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Hist1h2abC0HKE1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.52■□□□□ 0.56
Hist1h2abC0HKE1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hist1h2abC0HKE1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hist1h2abC0HKE1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hist1h2abC0HKE1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h2abC0HKE1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h2abC0HKE1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hist1h2abC0HKE1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hist1h2abC0HKE1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.49■□□□□ 0.55
Hist1h2abC0HKE1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Hist1h2abC0HKE1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hist1h2abC0HKE1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hist1h2abC0HKE1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hist1h2abC0HKE1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hist1h2abC0HKE1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hist1h2abC0HKE1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.48■□□□□ 0.55
Hist1h2abC0HKE1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hist1h2abC0HKE1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hist1h2abC0HKE1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h2abC0HKE1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h2abC0HKE1 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.47■□□□□ 0.55
Hist1h2abC0HKE1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h2abC0HKE1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.47■□□□□ 0.55
Hist1h2abC0HKE1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h2abC0HKE1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h2abC0HKE1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Hist1h2abC0HKE1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2abC0HKE1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2abC0HKE1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hist1h2abC0HKE1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2abC0HKE1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2abC0HKE1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2abC0HKE1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2abC0HKE1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h2abC0HKE1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hist1h2abC0HKE1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms