Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm12887B1AVM1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm12887B1AVM1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm12887B1AVM1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm12887B1AVM1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm12887B1AVM1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm12887B1AVM1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm12887B1AVM1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Gm12887B1AVM1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm12887B1AVM1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm12887B1AVM1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm12887B1AVM1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Gm12887B1AVM1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm12887B1AVM1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm12887B1AVM1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm12887B1AVM1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm12887B1AVM1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm12887B1AVM1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm12887B1AVM1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Gm12887B1AVM1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Gm12887B1AVM1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.38■□□□□ 0.21
Gm12887B1AVM1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm12887B1AVM1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm12887B1AVM1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm12887B1AVM1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm12887B1AVM1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm12887B1AVM1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm12887B1AVM1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.38■□□□□ 0.21
Gm12887B1AVM1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Gm6311-201ENSMUST00000073790 878 ntBASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Gm12887B1AVM1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm12887B1AVM1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms