Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav12d-1A0N8R0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Golph3-202ENSMUST00000226517 2359 ntBASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12d-1A0N8R0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Gm10420-201ENSMUST00000121713 882 ntBASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12d-1A0N8R0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12d-1A0N8R0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav12d-1A0N8R0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12d-1A0N8R0 Gm11175-201ENSMUST00000116172 543 ntBASIC16.32■□□□□ 0.2
Trav12d-1A0N8R0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12d-1A0N8R0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trav12d-1A0N8R0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav12d-1A0N8R0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav12d-1A0N8R0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12d-1A0N8R0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12d-1A0N8R0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12d-1A0N8R0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trav12d-1A0N8R0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-1A0N8R0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-1A0N8R0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-1A0N8R0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav12d-1A0N8R0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-1A0N8R0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trav12d-1A0N8R0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav12d-1A0N8R0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-1A0N8R0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12d-1A0N8R0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav12d-1A0N8R0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Iqck-206ENSMUST00000208658 2891 ntBASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Trav12d-1A0N8R0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12d-1A0N8R0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms